| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0700 |
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| Symbol | |
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| ID | 6114934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 957604 |
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| End bp | 958209 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641632185 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001759090 |
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| Protein GI | 170725064 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00161913 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGTAGCGA AGAATAAGTC AAATGTGTCA GACATTTTTG CTAAATACTC GAACAAGTTA
AAGCGAGTGA TTGGCCGGAT CGTACAGCCT GATGATATTG ACGACATAGT ACAAGATACC
TTTGTGCGCA GTTATGAGGC TGAACTAAAG CAAGAGATTA AGTATGTTCG TAGTTATATG
CTTAAAACGG CAAAACATCT GGCTTTGAAT CACGTCGCGA AATCTTCCTA TCGATTCAAT
CACTCTATTG AAGAGTTTGT TGAGACTCCC ATAGAGCTTA TCTCCACCTC CTTTGAATCT
GAGTTCGAGA GCAAAGAGCG ATTTCTATTT TTTTGTCGTG CAACGGAGCA GCTTTCAGAG
CCTGTTAGAA AATGTTTTAT TTTGAAAAAG GTGTATGGTT TAAGCCAAAG TGAAATTGCA
AAATACCTTA ATATCAGTGA AAGCACGGTA GAGAAGCATG TCGCCAAGGG ATTATTCAAA
AGCGTACAGT ATATGGAAAG CGTCAGTGCT CAAGGTGAAT CATTGCAAAC TCCTTCAGCG
TTATCAAAGC GGTCTGCAGG TCATCAAGAT AGTCAGTCTA ATATAAAAGA GTTTATTAGC
AGATGA
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| Protein sequence | MVAKNKSNVS DIFAKYSNKL KRVIGRIVQP DDIDDIVQDT FVRSYEAELK QEIKYVRSYM
LKTAKHLALN HVAKSSYRFN HSIEEFVETP IELISTSFES EFESKERFLF FCRATEQLSE
PVRKCFILKK VYGLSQSEIA KYLNISESTV EKHVAKGLFK SVQYMESVSA QGESLQTPSA
LSKRSAGHQD SQSNIKEFIS R
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