| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0610 |
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| Symbol | |
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| ID | 6114844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 856251 |
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| End bp | 857096 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632096 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001759001 |
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| Protein GI | 170724975 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTGA TATTAATCAT GGTATTGATT GCAATCAGTG GGCTACTGGC ACTTGGATTG
GCGTTATGGC ATCAGGAGAA ACAGCGACAG TGGCATATAC AGCGCTATTT GGAGACATCT
CAAGAGTCAG GCCTTGAGAA GCTAAGTAAG CTAGTGGTGC GTGTAGGTCA AGAGAAGCGT
GAGGAGCTTG AGCAGCAATT TATCGAAGCT GGTTTTTACG ATACTCGTTT TGCTCGCTTC
TACGTACCTG CCAAGATAGG ACTGGCTTTG GTGATTATTC TGCTGATTGT TATCTCAGAT
ATGACACTGT CGAATAAGGT GATGATAGGG GCTGTCGCCA TGGTAATGAC CTTGATAGTG
CCAGATTCTA TCTTAGCCAT GCGCAAGAAG ATGTTAGTGA AGAAAACCTC ACGCCAGCTT
CCTTACATGT TGGATATGAT GTCCGTATGT GTTCAAACAG GGATGACGGT TGAAGCGGCG
CTGGCTTACC TTGCTGAGGA GCTAAAAGCG TTCGATAAAG ATCTCTGTTT TCATATTAAG
AAAACCGCAG ATACCTCCCG CATCACAGGA TTAGAAAAAG CGCTATTAGA GCTCAGTGAG
CGGATCCCAA CCCCCGAAGT GCGTAGCTTT TCGTTAACTC TTATTCAAAA TATTCAGTAC
GGCACCTCTA TCGCCAATGT GTTGGCCGAT TTGGCTGAAG ATATGCGCCA GATGCAGGTG
CTTGCTATGG AGGAGAGCAT AGGTAAGTTA GCAGCGAAAA TGAGTGTACC TCTCATCCTC
TTCATCATGT TTCCTATCGT GGTGCTTATC TTAGCTCCCG GTTTTATGCA ACTCTCAATA
GGTTAA
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| Protein sequence | MMLILIMVLI AISGLLALGL ALWHQEKQRQ WHIQRYLETS QESGLEKLSK LVVRVGQEKR
EELEQQFIEA GFYDTRFARF YVPAKIGLAL VIILLIVISD MTLSNKVMIG AVAMVMTLIV
PDSILAMRKK MLVKKTSRQL PYMLDMMSVC VQTGMTVEAA LAYLAEELKA FDKDLCFHIK
KTADTSRITG LEKALLELSE RIPTPEVRSF SLTLIQNIQY GTSIANVLAD LAEDMRQMQV
LAMEESIGKL AAKMSVPLIL FIMFPIVVLI LAPGFMQLSI G
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