| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0587 |
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| Symbol | |
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| ID | 6114821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 829783 |
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| End bp | 832044 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632073 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001758978 |
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| Protein GI | 170724952 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.210295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTAAGT TCAAGTTAGC CCCAATATCG ACCGCCATTT TGCTTTCCAC ACTGGGTGGA
GCTGCATGGG CTGAGAGTGA CCAACTTAAT GTCGATAATC AAGAGATGGA GGTGATTAAT
GTCACCGCTA AACCTTTCGA TACCCCAGTA TCTTCACTGC CAGGAACGGT TCAGATCATT
GATCAGGAGG CGATTGCTGC ACAGATCAGT GTAAGTGCCG ATCTGTCTGG ATTGCTAGCA
AACCTAGTGC CGAGCTACGG CCCTGAAACT CAGATGATGT CCAGTACATA TCAGGGGTTT
CGTGGCCGAA AAGCGATAGT GATGATCGAC GGGGTCATTG TGTCGAATAC GCTACGTGAT
ACCAGTCGGG TGCTCTCATC TATCTCGGTG GAGAATATCG AACGTATCGA GGTGATACAG
GGGGCGAGCG CTGTATATGG AAATGGTGAA TCTGCTGGTG TGATCAACCT TATCACCTAT
CAGGCAAGTG AAGAGGGGAT CGCATTTTGG AGCCAAGCAA AAATTGATGG CTCTATCCAT
GACTCTGATT CAATCGGTTA CCAACTAAGC CAGCGAGTCT CTGGCACTCA AGGTCAATTT
AACTATCTGG CTCAGCTTAA CTGGCGAGAT TCAGGCACCC TATTTGATGG TGAAGGTACT
CAAATTCCCT CAGATCCAGC GGGACGTGGT GGGCAGGGGG AGCTAGAAGA CCTCGACGCC
TTAGTTAAAC TTGGTTATCT ATTTGATGAT GACTCAAGCA TGGCGCTGAA CCTGCACACT
AGAAAGCTTG AAAATCAACT GAGCTTTGCA CGTAAAACAG TGTTTGATGA AACCGTTGTG
GTTGATACCT CTAAACCTTT TACTGGTGAT GCGCCCTATA GCGAAAACAA GTATCTGCAG
TTTACCTATC ATGCTCCCTC GTTAGGTGGC CATCAGGTGA ATATCGAACT GAGTGCCAGC
GAAAGTGAAA ATACTCAAGC AAACAAGGTG CTGACTCAGT CTAAAAAGCA GGCTGCACGT
ATCGCAGCCC AGCCTCTAAG GTTACCTAGG GAGCAAGACC GACTCACCTA TGGTATCGAT
TATCAAGTGG ATAAAACCAA ACAGATCAGC GCGAAAGGGA TCTGCGAGAT CTGTAATGTC
GAGCAGACCA ACATCGCCCC TTTTGCAGAG TATGAGTTTA ACCAAGATGA CTTTATGCTG
CAGTTCGGCG TCCGTTATGA GCATTTTGAT CTCGATGTGC CAGATTATCT GGCTACAGGT
AGATATGGAT CTACACCATA CAGTGGCCAA ACCATCGAGG GTGGTAGCTT AAATTACAGT
AAGCCTGTAT TTAATTTGGG TGGGGTTTAT CGATTTGAAA CCACAGAAGT TTATGCCTCA
TTTTCACAAG GGTATGGACT TGGCGATCTG CGTCGACTTC GTTCTATAGA TGTGCCTGAG
GTTGAGCAAT ATGATGACAA GATGAAACCA ACCGAAGCCA ATAATTTTGA CTTGGGTTAT
CGGGGACAGT TCGATAGTTT CAGTTTCGAT ATAGGCCTTT TCTATACTCA ATCTGAACGT
GCCCAGAGTT ATGTCGATAT ATTGGATCAG GTGATCTACG GCACTTTAGC CACGATAGAC
CCTCGGCTGG TTTATGATCA ATCTAACACA CTAAATCCTG ATGCTATTGA TGCCGTGGTG
AGCCGCGATG AGAAGACCTA CGGGCTTGAG CTTATCTCAT CCTATGCGAT TAATGACACC
TTTACCTTTG GCGGAAATTT GAGTTATACC CAAGGTGAAT ATCGTCACCC GACAAAGGGT
TGGGTGGAGA TGAACAACGC CCGCATTAGC CCGATGAAAG CCAATCTATT TCTCGATATG
AACTTGAACG ATGAGTTTGG TGGTCTGTTA CAGGTCAACT ATGTAGGCTC ACGAGATGAA
GGTACAGAGA TAGATCTGCC ACTGCCGCAA AACGGTATGT GGGGAACCTT TAATGGCTAT
AGCTATTACA ACGCACCTAC CGAGAGTTAT ACCACGGTGG ATCTCAGCCT CTTCTATCAA
AGTCATTTTG GTCGATTTAC TTTAGGGATC AAAAACCTGT TTGATAAGGT TTATCGCCCA
GCCTATGCCC AGATGGGGAG TGGTAGTGTG TATGGCGGCA TCGACTTGCC AAGCGATCCT
ACTTTAGATC AGCTAGAAGG CTTAGTGCGT GACTATGCGT TCAAAGACAG CTACAACGCT
CAAGGAACGA CCTTCACCTT AGGTTATCAA GTTTATTATT AA
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| Protein sequence | MSKFKLAPIS TAILLSTLGG AAWAESDQLN VDNQEMEVIN VTAKPFDTPV SSLPGTVQII
DQEAIAAQIS VSADLSGLLA NLVPSYGPET QMMSSTYQGF RGRKAIVMID GVIVSNTLRD
TSRVLSSISV ENIERIEVIQ GASAVYGNGE SAGVINLITY QASEEGIAFW SQAKIDGSIH
DSDSIGYQLS QRVSGTQGQF NYLAQLNWRD SGTLFDGEGT QIPSDPAGRG GQGELEDLDA
LVKLGYLFDD DSSMALNLHT RKLENQLSFA RKTVFDETVV VDTSKPFTGD APYSENKYLQ
FTYHAPSLGG HQVNIELSAS ESENTQANKV LTQSKKQAAR IAAQPLRLPR EQDRLTYGID
YQVDKTKQIS AKGICEICNV EQTNIAPFAE YEFNQDDFML QFGVRYEHFD LDVPDYLATG
RYGSTPYSGQ TIEGGSLNYS KPVFNLGGVY RFETTEVYAS FSQGYGLGDL RRLRSIDVPE
VEQYDDKMKP TEANNFDLGY RGQFDSFSFD IGLFYTQSER AQSYVDILDQ VIYGTLATID
PRLVYDQSNT LNPDAIDAVV SRDEKTYGLE LISSYAINDT FTFGGNLSYT QGEYRHPTKG
WVEMNNARIS PMKANLFLDM NLNDEFGGLL QVNYVGSRDE GTEIDLPLPQ NGMWGTFNGY
SYYNAPTESY TTVDLSLFYQ SHFGRFTLGI KNLFDKVYRP AYAQMGSGSV YGGIDLPSDP
TLDQLEGLVR DYAFKDSYNA QGTTFTLGYQ VYY
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