Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0226 |
Symbol | |
ID | 6114449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 276340 |
End bp | 278391 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641631707 |
Product | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase |
Protein accession | YP_001758622 |
Protein GI | 170724596 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases [COG2030] Acyl dehydratase |
TIGRFAM ID | [TIGR02278] phenylacetic acid degradation protein paaN |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.577017 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAA AAAGTTATGT TTGCGGTGGT TGGGTTAGTG GAACTGGAAG GTGTGTTACA TCTAAAAATG CATTTACTGG TGAAACAGTA GCTACAACGT CAAGCATGGA ATCTGGTTTT GATAATGCTC TGGCATATGG CCGTCTCATT GCAGGAAATA AATTAAGGCA ATTTACCCTG CATGAAAGAG CTGAAATGCT CAAAAGTCTC GCAACTCATT TGATGAGGAA AAAAGAAGAT TTCTATCAAC TGTCCTACCT GACAGGCGCT ACCCGTTCTG ATAGTTGGAT TGATGTTGAA GGCGGAATTA GTACTCTGTT TAGCTATTCA GGTATGGTTC GACGTGAACT GGTCAATGAA AAGTTTATCG TTGAAGGGAA AGTAGAACCG CTATCAGTTA ATGGTTCGTT TATCGGCCAA CATATTTTGA TGCCTAAAAT GGGCGTATCA GTTCATATTA ATGCGTTCAA TTTCCCAGTG TGGGGAATGC TGGAAAAAAT AGCCCCAAGC TTGCTAGCTG GCATGCCTGT TATCGTCAAA CCCGCCACTG CCACTTGCTA CGTTGCTGAA GCTGTTGTGA AAGAGATTGT CGCTAGCAAA ATCCTACCTG AAGGCTGTGT ACAGCTTATC TGCGGTGGTG TAGGTGATCT ATTAGATCAT CTCACAGAAC AAGATGTAGT GACTTTTACC GGTTCAGCTA AAACTGGGAA AATGCTTCGT AGCCATGACA ATATCCTCAG CAAAAATATA CCATTTAATA TGGAAGCAGA TTCATTAAAT GCCTGTATTT TAGCACCCGA TGTGCAACAG GATATGCCAG AATTCGATGC ATTCATTAAA GAAGTACATC GTGAAATGAT AACTAAAGCT GGACAAAAGT GTACTGCAAT ACGTCGAGTA TTAGTGCCCA GTGCCATGAT GGATTGCGTG GGTGATGCGC TCAGTAAAAG AATTCAATCG ACCCTAGTGG GTGACCCTAC TAATGACGGT GTCAAAATGG GTGCGTTAGT AAACCAAGCA CAATGTGCAG ACGTGCAAAG TGCAGTGGAT CAACTGCTAT TCAGCTGTGA TGTTATTCAT GGTGGATGGG ACTCAATGAA TACCATTGGG ATCGACTATG ACAAGGGATC GTTCTTTCCT CCCACCTTAC TCCGTTGTGA TACCCCCCTT ACCAGTCAAC AGGTACATGA CATAGAAGCT TTTGGCCCCG TTTCGACCTT GATGCCCTAC GACAGTATTG AACAAGCTAT TGAAATTGTG GGTAAAGGAA AAGGTAGCTT AGTGTCATCG GTGTTCAGCT ATGACAACGA CAACATTCGC ACATTAGTTT ATGGCATGGC CTGTTACAAC GGTCGTATTC TAGTGAATAA TCGTGATTGC ATGAAAGAAT CGACGGGTCA TGGTTCGCCA CTCGCATCTA TGGTCCATGG TGGGCCTGGT CGTGCTGGGG GAGGAGAAGA ACTTGGTGGC ATTAGAGCAG TGAAGCACTA CATGCAGCGC ACTGCCATTC AGGGTTCACC CAATACCTTA CAAGCAGTAA CGAATGAATA TGTCCCTGGC GCAGATACCA CTACCAGTTT ACAGCATCCC TTTAAAAAGT ATTTCGAAGA ACTCAACATC GGTGAATCCC TAACGACCCA TAGACGCACA GTAACCGAAG CAGATATCGT CAATTTTGGC TGTCTGTCAG GTGATCATTT CTATGCGCAT TTTGATGAAA CTGCCGCGGC TGATTCGTTA TTTGGCAAGC GAGTGGCCCA TGGCTACTTC CTAATCTCAG CAGCTGCTGG CATGTTTGTC GAACCAGCTC CAGGACCAGT GTTGGCCAAT TACGGCTTGG ATAGTTTACG TTTCATTCAA CCTGTAGGGA TCGGTGACAC TATTGAAGTC TCGTTGACAG TAAAGCGCAA GATCTACAAA AAAACCAAGC CTGACGATGC TCACCCAGCA GGTGTGGTTG TTTGGGATGT CAAAGTGGTG AATCAAGATA ATGAAGTGGT AGCCCTCTAC GACATTTTAA CATTAGTCGC GTACAAGAAC GCTGCACAGT AA
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Protein sequence | MKIKSYVCGG WVSGTGRCVT SKNAFTGETV ATTSSMESGF DNALAYGRLI AGNKLRQFTL HERAEMLKSL ATHLMRKKED FYQLSYLTGA TRSDSWIDVE GGISTLFSYS GMVRRELVNE KFIVEGKVEP LSVNGSFIGQ HILMPKMGVS VHINAFNFPV WGMLEKIAPS LLAGMPVIVK PATATCYVAE AVVKEIVASK ILPEGCVQLI CGGVGDLLDH LTEQDVVTFT GSAKTGKMLR SHDNILSKNI PFNMEADSLN ACILAPDVQQ DMPEFDAFIK EVHREMITKA GQKCTAIRRV LVPSAMMDCV GDALSKRIQS TLVGDPTNDG VKMGALVNQA QCADVQSAVD QLLFSCDVIH GGWDSMNTIG IDYDKGSFFP PTLLRCDTPL TSQQVHDIEA FGPVSTLMPY DSIEQAIEIV GKGKGSLVSS VFSYDNDNIR TLVYGMACYN GRILVNNRDC MKESTGHGSP LASMVHGGPG RAGGGEELGG IRAVKHYMQR TAIQGSPNTL QAVTNEYVPG ADTTTSLQHP FKKYFEELNI GESLTTHRRT VTEADIVNFG CLSGDHFYAH FDETAAADSL FGKRVAHGYF LISAAAGMFV EPAPGPVLAN YGLDSLRFIQ PVGIGDTIEV SLTVKRKIYK KTKPDDAHPA GVVVWDVKVV NQDNEVVALY DILTLVAYKN AAQ
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