Gene Swol_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1287 
Symbol 
ID4281722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp1487594 
End bp1488043 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content44% 
IMG OID638138162 
Productlipoprotein signal peptidase 
Protein accessionYP_753967 
Protein GI114566813 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0748457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGATTTT GGGGTAGCTT TTTGCTGGTT GTAATACTGG ATAGAATAAG CAAAGCCTGG 
GTTCTGGCGT CGTTTTTGCC GAGAGAAAGC CGGTCACTTA TTGAGGGGGG CCTTTATTTA 
ACCTATGTAC AGAATAGAGG AGCCGCTTTT GGCCTGATGC CAGGGAAGTC ATGGCTGTTT 
TTTATTTCTG CGCTCTTGGT TATAATGGCT TTAGTGATTT ATAACTGGCG CAGTAAGGCT 
TCACCGCTTG AAGCACTATC TACCGGTCTT ATCGCTGGTG GTGCTCTGGG AAATCTTATT 
GATCGCTATT TCTATGGTTT TGTAATTGAT TTTATTGACC TGGGTTGGTG GCCGGTTTTC 
AACCTGGCCG ATAGCGCTAT AGTCTGTGGG GGAATATTAC TGCTAATATT GGTTTTGCTT 
GACGGAAAAA GAGAGGAAAG AAATGCCTAG
 
Protein sequence
MRFWGSFLLV VILDRISKAW VLASFLPRES RSLIEGGLYL TYVQNRGAAF GLMPGKSWLF 
FISALLVIMA LVIYNWRSKA SPLEALSTGL IAGGALGNLI DRYFYGFVID FIDLGWWPVF 
NLADSAIVCG GILLLILVLL DGKREERNA