Gene Swol_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1283 
Symbol 
ID4281718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1483394 
End bp1484689 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content48% 
IMG OID638138158 
Productdihydroorotase 
Protein accessionYP_753963 
Protein GI114566809 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTAC TTATTAAAGG GGGAAGGCTA ATCGACCCCT TCAACCATAT TGATGCTATT 
CAGGATCTTT TGGTGGAAGA CGGTAAAATC CGGAGTCGGG GTAATGCTCT AGACGATAGC
GGCTGTGAAA TAATCGATGC CAGTGGGAAA ATAGTCTGCC CGGGTTTTAT CGACATTCAT
GTTCATCTTC GGGAACCCGG TTTTGAATAC AAGGAAGATA TAGCTTCCGG TACCAGAGCA
GCGGCTTGTG GGGGCTTTAC TACGGTTTGC TGTATGCCCA ATACTGAGCC GGTGATAGAT
AATGAAGCGG TGGTAGGTTT TGTCAGGGAA AAAGCCAGAA AGGTCGGCAT AGTCAATGTT
TTGCCGGTGG GAAGTATTAG TAAAAAGCAG GCCGGTTTGG AATTAAGCGA AATTGCCGAG
CTGGTAACGG CTGGATGTGT GGCCATATCC GATGATGGCA AGCCCGTTAT GAAGGCTAAT
ATTATGCGTA ATGCTCTGGA TTACGCAAAA ATGTTCGGCC TGCCGGTATT ATCGCATTGC
GAGGATCTTA ACCTGGTAAA CGGGGGCTTG ATGCATGAGG GCTACTACTC TACCATTTAT
GGGTTAAGAG GGATACCCGC TGCAGCTGAA GAGGTAATGG TAGCCCGTGA TATTATTTTA
GCTCGATTGA CTGGCGGACA TTTGCATATT TGCCATGCTT CCACGGCAGG TTCTATGGCC
TTAGTTCGCC AGGCTAAAGC TGAGGGACTG AATGTGACTT GTGAAGTGAC TCCTCACCAT
TTGACCCTGA GTGATGAAAT AATAGACGGC TATGATGCCG ATACCAAAGT AAATCCCCCC
TTACGCTCCG AGGAACACCT GCTGGCTTTG CGGGAGGCCT TGCTTGATGG TACCGTGGAT
TGCATTGCCA CCGATCACGC GCCCCATCAT TTTGAAGCCA AGGACTGTGA ATACGAATTG
GCTGCCTGCG GAATATCCGG ATTGGAAACG GCGATAGCAG TAATAATGGA TAAGCTGGTA
AGGCCCGGAC TTTTGGATAT TAAGGATATG GTCAAGTTGT TTACTAGTGG GCCAGCCGGA
GTTATGGGTA TTGATAAAGG CAGTTTGGAA GAAGGGAAGT CGGCAGACAT AACGATTATT
GACTCGGAAA TAGTCAAAAC CGTGGACCCT CGCACTTTTA AATCCAAAGG CAGGAACACC
CCCTATAAAG GAATGGAGCT CCAAGGTTGG CCCTGTATGA CTCTGGTTAA CGGGGTGCTG
GTAGCGCAGA ATGGTGAAAT AGTACTGAAG AAGTAA
 
Protein sequence
MRLLIKGGRL IDPFNHIDAI QDLLVEDGKI RSRGNALDDS GCEIIDASGK IVCPGFIDIH 
VHLREPGFEY KEDIASGTRA AACGGFTTVC CMPNTEPVID NEAVVGFVRE KARKVGIVNV
LPVGSISKKQ AGLELSEIAE LVTAGCVAIS DDGKPVMKAN IMRNALDYAK MFGLPVLSHC
EDLNLVNGGL MHEGYYSTIY GLRGIPAAAE EVMVARDIIL ARLTGGHLHI CHASTAGSMA
LVRQAKAEGL NVTCEVTPHH LTLSDEIIDG YDADTKVNPP LRSEEHLLAL REALLDGTVD
CIATDHAPHH FEAKDCEYEL AACGISGLET AIAVIMDKLV RPGLLDIKDM VKLFTSGPAG
VMGIDKGSLE EGKSADITII DSEIVKTVDP RTFKSKGRNT PYKGMELQGW PCMTLVNGVL
VAQNGEIVLK K