Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1117 |
Symbol | |
ID | 4282953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1287738 |
End bp | 1290215 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638137989 |
Product | hypothetical protein |
Protein accession | YP_753798 |
Protein GI | 114566644 |
COG category | [S] Function unknown |
COG ID | [COG1700] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCAGC TTTTTGAATT GGCCAGTGAT CTGGTACACC TGAAATTTAG TTTATCCAGT AACAAAGGAC CAAAAAAACC TCCAGGTCAG GAAATCTCTG GCCGTCTGGT TATTACCGCC CACCGGGCAG GTCTTACCTG GCAAAAAATA TGGCGTCAGG GTGTACCCCC AAAGCTGGCA AATTGCCCGC AACAATATGC CGGGCCCTGT CTTTTTGAAG AAACTAATTA TAAGCTATAT GCTCGGTCCC AGCCTGGTCA TAAACTGGAT ATAGTGCACC GTGATCCGGT TATAATTAGA GATTTGGATT ATGACGATGT TCATTCCACA GTTTATGGAT ATATTAACTT CGGTTCTCAG GCAGGTTACA GCGAATTTAC GATACTGCTT GATGATAAAC CGGAGTTTTC ATTTCAGGTC GAGGTTTTCC CCAGCAAGTT GGACTATGCC AGTGATTATG AGGAAATACT GGCATCGGTA CAGGATATGA TGACAGGTTT GGCCATGGAG TACCTGCGCT CAACCTACCA AATGGGTACC ACTACCCCCT CCCCGTCTAC TAATTTAGAA TGGTTTGTTC TCTTACGGGG TATTATAGAC GATTTGGAAA GGGCCTTAAA CTTTATTGCC AGTAAACCGG TAAGGGGATT GCAAAGAGAG CAGATGCCGG TAAGGGTGGA AAAGATAAAG CATATTAATG GACGGGTTTT GGCTGCAGTA AGGAAAGGTT CGGGCCGGGG TGGTTTTGTT CAGACAAGAA GTAACATACC GCTTCGCCAG TATATTTATG AAGACCGTCC TCGGAGTACC CTGAATACTA TGGAACATCG CTGGTTATCG CGGCAGCTGC AGCTTATTCG ACAGCGATTA AATCGCTTAC GTCTGGAAGA ACGTCAGTGG GAAATAACTC CCCGGCGCCG TACGGCTTTG CAGGAATTAG AGGACATGGA AAAGCGGGTG CTGCGTCTAC AAGGTTTGGA ACCGCTGGCC GTTGCCAATG GGGAAATTCT GGCAGGTTTT GTTTCGCTGC AGTTATTAGG GTCACCCGGC TATCGGGAAG CTTATACCAA CTGCCTGGCT CTAGCGCTGG GTCTGCGGAT TGAAGGGGGT CCCTTACAGT TATCAGTTAA AGATTTGAAT TTATTATACG AGTACTGGTG CTATCTATCT CTGCTTCGTA TAATTGGGGA GGAAACCGGG CAGCAAATCC CGGTAAAAGA GCTGTTTGCG GTTAAACAGA TGGGCCTGCG GGTTTTACTT AACCGGGGGA GGGAACAGCG GGTGTGTTTT GCATCCGGTG GAGACCGGCG TATAACAGCT ACCTATAACC CCAGTTTTCA GGGAGAAGCG ATGCTTATTC CCCAGCGTCC GGATATGGTG ATTACCCTGG AAAATGAGGC CTGGCCAGCC ATGCATTTAG TTCTTGATGC CAAGTACAGG TTGGATGCTT CTGATGAATA CATACAGCGA TATAATTCCC AGGGTCCTCC AGAAGATGCT CTCAATGCTA TGCACCGGTA TCGCGATGCG ATCCTGGAAT TTCAAAACCG TAGTGGTGAA AAACCGGTGC AACGGAGAAC CGTGGTACAG GCAGCAGCCG TATTTCCCGG AGGTAGAACG GAAGATACTT TTTTTAATAG TAAGCTGTGG AAAGCCCTAA AACATATTGG AGTAGGTGCT TTACCTTTTT TACCAGGTAA CACGGAATAT GTTAGAGAGT GGTTGCGCAG CAGCTTGAAA ATGGGTGGTT TCAGTATTGC CCAATATACT TTGCCCCACA GTATATACGA ACGAGCCCGG GATTGGCGTT TATCTGCAGC CGAACCTGTA GTTTTAGGTA CCTTAAGTGC CGGCAATCAG GCCCAGCATT TACAATGGAT TATTGAAGAG CGGCTCTATT ACATGCCGGT GTTAAAGACC CAGCTGCGCC AATACGCCAC CAAATGGGTG GCGATATACT CGCCCCTGGA AATACGCCGG CCCGGTGCAG TAACTCATTA TGCCCCGGTT GAAAGCATTG ACATTGTTAA AAGAAAGGAA ATACTAACCC CCTGGAGTCC AAAACGGGAT TTAGAAGAGC TTCAGGTACT TTTTAAATTA GGTGAGGTAA TCGAAAAGAA ACCCCCGGTA AGCAATATCA GTGGATATAG TTTCACTCAA CACCGCTGGA CCAGCCGGTT GGGCCTGGAG CGTGCCCGCA ATCTTGAAGA ACTGCTGTTG GAAACGGAGC CAGAATGGAG ATTATTTGAG GATTTAAGTG CTCTTGGTTC CAAGTTTACC CTTGATCCCA GCGAACCGAT TCGTCTGTTG GATAAAGACA ACCCTTACGG ACGAGTCTGG TTTCGTCTGG AAGACGGCTT CAGTATTCGT TATGCCGGAG CCTCGGGATA TGCTATTAAG AAGGCCCCTG GCATTAAACC TCAGTATTTT GTTAATTATA ATAAGCTTCT TACAGAAATA GAAAAACAAC TTCGGTAA
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Protein sequence | MEQLFELASD LVHLKFSLSS NKGPKKPPGQ EISGRLVITA HRAGLTWQKI WRQGVPPKLA NCPQQYAGPC LFEETNYKLY ARSQPGHKLD IVHRDPVIIR DLDYDDVHST VYGYINFGSQ AGYSEFTILL DDKPEFSFQV EVFPSKLDYA SDYEEILASV QDMMTGLAME YLRSTYQMGT TTPSPSTNLE WFVLLRGIID DLERALNFIA SKPVRGLQRE QMPVRVEKIK HINGRVLAAV RKGSGRGGFV QTRSNIPLRQ YIYEDRPRST LNTMEHRWLS RQLQLIRQRL NRLRLEERQW EITPRRRTAL QELEDMEKRV LRLQGLEPLA VANGEILAGF VSLQLLGSPG YREAYTNCLA LALGLRIEGG PLQLSVKDLN LLYEYWCYLS LLRIIGEETG QQIPVKELFA VKQMGLRVLL NRGREQRVCF ASGGDRRITA TYNPSFQGEA MLIPQRPDMV ITLENEAWPA MHLVLDAKYR LDASDEYIQR YNSQGPPEDA LNAMHRYRDA ILEFQNRSGE KPVQRRTVVQ AAAVFPGGRT EDTFFNSKLW KALKHIGVGA LPFLPGNTEY VREWLRSSLK MGGFSIAQYT LPHSIYERAR DWRLSAAEPV VLGTLSAGNQ AQHLQWIIEE RLYYMPVLKT QLRQYATKWV AIYSPLEIRR PGAVTHYAPV ESIDIVKRKE ILTPWSPKRD LEELQVLFKL GEVIEKKPPV SNISGYSFTQ HRWTSRLGLE RARNLEELLL ETEPEWRLFE DLSALGSKFT LDPSEPIRLL DKDNPYGRVW FRLEDGFSIR YAGASGYAIK KAPGIKPQYF VNYNKLLTEI EKQLR
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