Gene Swol_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1117 
Symbol 
ID4282953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1287738 
End bp1290215 
Gene Length2478 bp 
Protein Length825 aa 
Translation table11 
GC content47% 
IMG OID638137989 
Producthypothetical protein 
Protein accessionYP_753798 
Protein GI114566644 
COG category[S] Function unknown 
COG ID[COG1700] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAGC TTTTTGAATT GGCCAGTGAT CTGGTACACC TGAAATTTAG TTTATCCAGT 
AACAAAGGAC CAAAAAAACC TCCAGGTCAG GAAATCTCTG GCCGTCTGGT TATTACCGCC
CACCGGGCAG GTCTTACCTG GCAAAAAATA TGGCGTCAGG GTGTACCCCC AAAGCTGGCA
AATTGCCCGC AACAATATGC CGGGCCCTGT CTTTTTGAAG AAACTAATTA TAAGCTATAT
GCTCGGTCCC AGCCTGGTCA TAAACTGGAT ATAGTGCACC GTGATCCGGT TATAATTAGA
GATTTGGATT ATGACGATGT TCATTCCACA GTTTATGGAT ATATTAACTT CGGTTCTCAG
GCAGGTTACA GCGAATTTAC GATACTGCTT GATGATAAAC CGGAGTTTTC ATTTCAGGTC
GAGGTTTTCC CCAGCAAGTT GGACTATGCC AGTGATTATG AGGAAATACT GGCATCGGTA
CAGGATATGA TGACAGGTTT GGCCATGGAG TACCTGCGCT CAACCTACCA AATGGGTACC
ACTACCCCCT CCCCGTCTAC TAATTTAGAA TGGTTTGTTC TCTTACGGGG TATTATAGAC
GATTTGGAAA GGGCCTTAAA CTTTATTGCC AGTAAACCGG TAAGGGGATT GCAAAGAGAG
CAGATGCCGG TAAGGGTGGA AAAGATAAAG CATATTAATG GACGGGTTTT GGCTGCAGTA
AGGAAAGGTT CGGGCCGGGG TGGTTTTGTT CAGACAAGAA GTAACATACC GCTTCGCCAG
TATATTTATG AAGACCGTCC TCGGAGTACC CTGAATACTA TGGAACATCG CTGGTTATCG
CGGCAGCTGC AGCTTATTCG ACAGCGATTA AATCGCTTAC GTCTGGAAGA ACGTCAGTGG
GAAATAACTC CCCGGCGCCG TACGGCTTTG CAGGAATTAG AGGACATGGA AAAGCGGGTG
CTGCGTCTAC AAGGTTTGGA ACCGCTGGCC GTTGCCAATG GGGAAATTCT GGCAGGTTTT
GTTTCGCTGC AGTTATTAGG GTCACCCGGC TATCGGGAAG CTTATACCAA CTGCCTGGCT
CTAGCGCTGG GTCTGCGGAT TGAAGGGGGT CCCTTACAGT TATCAGTTAA AGATTTGAAT
TTATTATACG AGTACTGGTG CTATCTATCT CTGCTTCGTA TAATTGGGGA GGAAACCGGG
CAGCAAATCC CGGTAAAAGA GCTGTTTGCG GTTAAACAGA TGGGCCTGCG GGTTTTACTT
AACCGGGGGA GGGAACAGCG GGTGTGTTTT GCATCCGGTG GAGACCGGCG TATAACAGCT
ACCTATAACC CCAGTTTTCA GGGAGAAGCG ATGCTTATTC CCCAGCGTCC GGATATGGTG
ATTACCCTGG AAAATGAGGC CTGGCCAGCC ATGCATTTAG TTCTTGATGC CAAGTACAGG
TTGGATGCTT CTGATGAATA CATACAGCGA TATAATTCCC AGGGTCCTCC AGAAGATGCT
CTCAATGCTA TGCACCGGTA TCGCGATGCG ATCCTGGAAT TTCAAAACCG TAGTGGTGAA
AAACCGGTGC AACGGAGAAC CGTGGTACAG GCAGCAGCCG TATTTCCCGG AGGTAGAACG
GAAGATACTT TTTTTAATAG TAAGCTGTGG AAAGCCCTAA AACATATTGG AGTAGGTGCT
TTACCTTTTT TACCAGGTAA CACGGAATAT GTTAGAGAGT GGTTGCGCAG CAGCTTGAAA
ATGGGTGGTT TCAGTATTGC CCAATATACT TTGCCCCACA GTATATACGA ACGAGCCCGG
GATTGGCGTT TATCTGCAGC CGAACCTGTA GTTTTAGGTA CCTTAAGTGC CGGCAATCAG
GCCCAGCATT TACAATGGAT TATTGAAGAG CGGCTCTATT ACATGCCGGT GTTAAAGACC
CAGCTGCGCC AATACGCCAC CAAATGGGTG GCGATATACT CGCCCCTGGA AATACGCCGG
CCCGGTGCAG TAACTCATTA TGCCCCGGTT GAAAGCATTG ACATTGTTAA AAGAAAGGAA
ATACTAACCC CCTGGAGTCC AAAACGGGAT TTAGAAGAGC TTCAGGTACT TTTTAAATTA
GGTGAGGTAA TCGAAAAGAA ACCCCCGGTA AGCAATATCA GTGGATATAG TTTCACTCAA
CACCGCTGGA CCAGCCGGTT GGGCCTGGAG CGTGCCCGCA ATCTTGAAGA ACTGCTGTTG
GAAACGGAGC CAGAATGGAG ATTATTTGAG GATTTAAGTG CTCTTGGTTC CAAGTTTACC
CTTGATCCCA GCGAACCGAT TCGTCTGTTG GATAAAGACA ACCCTTACGG ACGAGTCTGG
TTTCGTCTGG AAGACGGCTT CAGTATTCGT TATGCCGGAG CCTCGGGATA TGCTATTAAG
AAGGCCCCTG GCATTAAACC TCAGTATTTT GTTAATTATA ATAAGCTTCT TACAGAAATA
GAAAAACAAC TTCGGTAA
 
Protein sequence
MEQLFELASD LVHLKFSLSS NKGPKKPPGQ EISGRLVITA HRAGLTWQKI WRQGVPPKLA 
NCPQQYAGPC LFEETNYKLY ARSQPGHKLD IVHRDPVIIR DLDYDDVHST VYGYINFGSQ
AGYSEFTILL DDKPEFSFQV EVFPSKLDYA SDYEEILASV QDMMTGLAME YLRSTYQMGT
TTPSPSTNLE WFVLLRGIID DLERALNFIA SKPVRGLQRE QMPVRVEKIK HINGRVLAAV
RKGSGRGGFV QTRSNIPLRQ YIYEDRPRST LNTMEHRWLS RQLQLIRQRL NRLRLEERQW
EITPRRRTAL QELEDMEKRV LRLQGLEPLA VANGEILAGF VSLQLLGSPG YREAYTNCLA
LALGLRIEGG PLQLSVKDLN LLYEYWCYLS LLRIIGEETG QQIPVKELFA VKQMGLRVLL
NRGREQRVCF ASGGDRRITA TYNPSFQGEA MLIPQRPDMV ITLENEAWPA MHLVLDAKYR
LDASDEYIQR YNSQGPPEDA LNAMHRYRDA ILEFQNRSGE KPVQRRTVVQ AAAVFPGGRT
EDTFFNSKLW KALKHIGVGA LPFLPGNTEY VREWLRSSLK MGGFSIAQYT LPHSIYERAR
DWRLSAAEPV VLGTLSAGNQ AQHLQWIIEE RLYYMPVLKT QLRQYATKWV AIYSPLEIRR
PGAVTHYAPV ESIDIVKRKE ILTPWSPKRD LEELQVLFKL GEVIEKKPPV SNISGYSFTQ
HRWTSRLGLE RARNLEELLL ETEPEWRLFE DLSALGSKFT LDPSEPIRLL DKDNPYGRVW
FRLEDGFSIR YAGASGYAIK KAPGIKPQYF VNYNKLLTEI EKQLR