Gene Swol_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0447 
Symbol 
ID4283391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp529408 
End bp529995 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content43% 
IMG OID638137334 
Productputative germination protein GerM 
Protein accessionYP_753155 
Protein GI114566001 
COG category[R] General function prediction only 
COG ID[COG5401] Spore germination protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCA AAGTAGTCAG TATTTTGGCC GTGATACTTC TGGTGCTTTG TCTTTTAAGT 
GGCGGCTGTT CTTCAGTAGC TCCCGAGCAA AACCTGAAAG CATGGAAAGA TCTTATAAAG 
CTGGCACCGG AAGATAAAAG CAAGACGGAA GTGAAGAAGA ATCCGGAAGA ACTTATCCCA 
ACTCGGGAAA AAGGTGAGAG CATTAATATA AAATTGTACT TTGCTCAAGC TGATAAAGAG 
GAGTTGGTAA TGGAAAGGAG AGAAATAACC AGGACAGAGG GTATCGCTCG CAGCACTTTG 
CAAGAACTTC TAAAGGGTCC AGATAATCCG GCTTATCGTA ACGTATTTCC GGAAGGAACC 
AGGCTTTTGG ACATAAATCT AAAACCGGAT GGGACTTGCA TATTGGATTT TAGTTCTGAG 
CTTCGCCGCC TGGAGAATGA GGTCGAGGAA AAACAGATGC TTGATGCAGT TTGCCAAACT 
CTGGCCCAAT TCCCGGCGGT AAAACAGCTG GTTTTCATGA TAGATGGTCG AGAAATAGAT 
ATAATAAAGG GGGAAGTGGA TTTTACTTCT CCTATCAAAG TGAGTTAG
 
Protein sequence
MTSKVVSILA VILLVLCLLS GGCSSVAPEQ NLKAWKDLIK LAPEDKSKTE VKKNPEELIP 
TREKGESINI KLYFAQADKE ELVMERREIT RTEGIARSTL QELLKGPDNP AYRNVFPEGT 
RLLDINLKPD GTCILDFSSE LRRLENEVEE KQMLDAVCQT LAQFPAVKQL VFMIDGREID 
IIKGEVDFTS PIKVS