| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0093 |
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| Symbol | |
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| ID | 4281230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 99163 |
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| End bp | 101637 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136995 |
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| Product | phosphoprotein phosphatase |
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| Protein accession | YP_752821 |
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| Protein GI | 114565667 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR02865] stage II sporulation protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGGGA AAACGGAGAT TTATCCTTAT CAGAGAGTGG CTGAGAAAGC AGGCAATAGA
CCCCGGGGCA AAAAGCATGA GTGGATGCAG AATTTTAAAG AAAGATCAGG AAGGGGACAA
GCTTATTTAA GAGATTTTAT AAGAAAAGAA GGTTCCACTG TTCTTCACTC GCTGCTAAAC
CTGGAAAACC TGCTCTTGGC GGTGGGAGCG TTGATTTTGT CCCGGGCTTT CGTTCTGGGC
GATTTGCTCC CCTTTGTTTA CGCCTATCTG GCTGTTTTCG GCAGAAATGA GAAAGGCCGG
GCCTTTCTAT TGTTGGCATT TGCCAGCCTG GGTTTGGCCA GTGTATTGCA TGGTTTTGCT
TTAGGCAGCA GTATAATTAG TTTAGTTATA TTGCTGGCAG TGCTAAACCG GCTGAAAATA
TCGCCGGAAA GAGCCTGGTG GATGCTGCCT CTAGTCAGCA TTTCTGTGCT ATTTGTATGC
AAGAGCCTTT TTCTCCTGGG GGGAGAATTT ACCTTATATG CTGAAATGGT AGTGGTTTTT
GAAGCGGTGA TAGCCGGCGT TCTTGGCTTC GTTTTTATGG TTGCCCATGA AGCCATAGCC
CAGAGGAAAG CTCTAGCCAG TTTGAATTTT GAGGAGTTTG CCGCCTTTTT AGTTCTGGGC
ATAGGCCTGG TCATGGGTTT AAATAATATT GAGATAGCGG GCTTAAGTGT CAGCAGCATA
ATCTGCCGAC TGGGAATAAT GCTGGCAGCT CTATTGTGGG GCAGTGGCGG GGGAACCATA
GTAGGAGTAA TGACGGGAAT CATTCCTTCT ATTTCTTCTA GCATTTTTGC CCAGAGCCTG
GGTATGTATG CTGTTTCCGG TCTTCTTGCC GGGCTGTTTA GAAATCTGGG CCGCCTGGGC
ATTGTTTTGG GCTTCATGCT GGGAACTATG GCTCTGTCCA TGTTTATACC GGAAACTCAG
GCCACCGTTC TGGGGATATG GGAAACAGCC ATAGCTAGCC TCTTATTTTT CCTCCTGCCG
GAGTCATTGC AGGATAAAAT GCCCCTGCAA GCCCTGGGGC CCTTGAGCAG TCGCCTCAGG
GAGCAAGGTG AAATAATTGA CAAGCAGCTG GAGGAAAGTA CTCGCACCCG CATCCAAAAC
CTGGCAGCAG TTTTTGAAGA GCTGAGCAGC AGTTTTAGCG GGGAAATGGA AGTGAAAAGA
AAAAACAACC AGGTAGCCTA TCTTAATTAC CTTTATGAAC AGGTTTCGCA AAACTTTTGT
GAGAAATGCT CGCGCTATGA TATCTGCTGG GGCCGGGATT CTTACCATAG CTCCCAGCAG
ATTTTGGAAC TATTCTCTAT TGTGGAAAAA GCTGAGCTCA GCTATGAAAA AGCCCCCCGC
GATTTTAAAC GGCGTTGCCT TTATGCCCGG GAAATGATAA GCACTATAAA CTACCTCTTT
GATCGCCTGC TCTTGAACGA GTACTGGTCT GACAAACTTT GCGAATCCCG GGAATTGGTG
GCTACCCAGC TCAAAGGGGT CAGCCAGCTG ATTAAAAACC TGGCTCAGGA AATTGATGTA
AAAGCTGAAT TTGACCTGGA GCTCAGAGAA CAGTTATTGA GAGAAAGCAA ACAACAAGGT
CTTAAAATAA AAGAAATGAC TCCTCTGCGC AGTAACGGGC AATTATTGCT GAATGTAGTG
GCCGATCCTT GTCGCGAAGG GGAATTTTGC CAAAATATTA TTGCTCCCGC TTTCTCCAAC
ATCCTGGGAG AAAGGATGGA GGTTTGTGAA AAAACCTGTC CCCGTTTCCG GGCCTGGGGA
CAGTGCAAAT TTACCATGAG CCGAGCTTGC AGCTACAAGA TAAACAGCGG GGTGGTGCAA
GTGGGTAAGG AAGCGGTTTG CGGTGATAGC TTTACCATAG CCAGTCTTAA AGAAGGCAAA
GAATTAATAG CCCTCAGTGA TGGAATGGGG GTGGGGGAGA AAGCCTGCGG TGATAGCCAG
GCTACAGTAA GACTGCTGGA AAATCTTTTG GAAAGCGGCT TCCAGCGCGA TGTAGCGCTA
AACACTATAA ATACTGTATT GCTCCTTCGT TCAGCCCAGG AGAGCTTTGC CACCCTGGAT
ATGATCATGG TTGATCTCTA TAGCGGGGAT GCCGATTTCA TCAAAGTGGG CAGTGCGCCC
TCCTATATAA AAAGAGATAA AAAGGTGGGG ATGATAAGCG CCCACTCCCT GCCCATAGGA
ATATTGGAGA ATGTAGATGT AGTAAGCGAA AGACACAGCC TCTGCCCCCG GGATATTCTG
GTCATGGTAA GTGACGGAGT TCTGGAGGTG TCTCGGCAGT TTAATGAAAC CTGGATAATA
GACTTTTTAA GCCAGGTGGA CGAAAGCGAC CCACAACTCT TGGCAGAAAT GATTATGAAT
AAAGCCCTGG GCATGTGCAA AGGAAAACCC GCCGATGATA TGACTGTAAT CTGTCTTCGC
GTAGAATTGC AGTGA
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| Protein sequence | MLGKTEIYPY QRVAEKAGNR PRGKKHEWMQ NFKERSGRGQ AYLRDFIRKE GSTVLHSLLN
LENLLLAVGA LILSRAFVLG DLLPFVYAYL AVFGRNEKGR AFLLLAFASL GLASVLHGFA
LGSSIISLVI LLAVLNRLKI SPERAWWMLP LVSISVLFVC KSLFLLGGEF TLYAEMVVVF
EAVIAGVLGF VFMVAHEAIA QRKALASLNF EEFAAFLVLG IGLVMGLNNI EIAGLSVSSI
ICRLGIMLAA LLWGSGGGTI VGVMTGIIPS ISSSIFAQSL GMYAVSGLLA GLFRNLGRLG
IVLGFMLGTM ALSMFIPETQ ATVLGIWETA IASLLFFLLP ESLQDKMPLQ ALGPLSSRLR
EQGEIIDKQL EESTRTRIQN LAAVFEELSS SFSGEMEVKR KNNQVAYLNY LYEQVSQNFC
EKCSRYDICW GRDSYHSSQQ ILELFSIVEK AELSYEKAPR DFKRRCLYAR EMISTINYLF
DRLLLNEYWS DKLCESRELV ATQLKGVSQL IKNLAQEIDV KAEFDLELRE QLLRESKQQG
LKIKEMTPLR SNGQLLLNVV ADPCREGEFC QNIIAPAFSN ILGERMEVCE KTCPRFRAWG
QCKFTMSRAC SYKINSGVVQ VGKEAVCGDS FTIASLKEGK ELIALSDGMG VGEKACGDSQ
ATVRLLENLL ESGFQRDVAL NTINTVLLLR SAQESFATLD MIMVDLYSGD ADFIKVGSAP
SYIKRDKKVG MISAHSLPIG ILENVDVVSE RHSLCPRDIL VMVSDGVLEV SRQFNETWII
DFLSQVDESD PQLLAEMIMN KALGMCKGKP ADDMTVICLR VELQ
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