Gene Swol_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0026 
Symbol 
ID4281522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp31006 
End bp31611 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content35% 
IMG OID638136923 
ProductTetR family transcriptional regulator 
Protein accessionYP_752756 
Protein GI114565602 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000327076 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTC CACTAGAAAA GCAAAATAAA GAAAGACGAC AGAAGATATT AACATGTTCT 
TTAGATTTAT TCATTGAAAA GGGCTACTAC AATACATCAA TCCGCGATAT TATCGCTCTG 
TCAGAAGTTG GAACAGGTAC TTTTTATAAT TATTTTGTTG ACAAGGAAGA TATTTTAAAA 
AACCTTCTTG AGGACTTTGC CAAACAAATT ATCTCGAGTA TAAGCGAGTA CTATTTGGTA 
GAAAAGGACT TGTATGAGCG ATTTATCGAG ACTAAGCGAT TAACCATGGA GGTTTTTGCT 
CAAAATGAAA CCTTGTCGGA GATATATAGT CGAGTTGCTG GATCAAGTGC TCCTATTGAT 
CAATGTTTAA AACAATTCGA GGATAGGCTG CTAGAGTTTT ACTCAAGAAA TATTGAATAC 
GGTATTAAAA AAGGTGTATT TAAAAATGTC CCGGTCTCCC CTATCGCACA CTCCATATTA 
GCCATTGAAA AATTCTCGTT ATACAAATGG GTAGTTCTCA AGGCTATAAC AAAAGAGGAA 
ATGATAGAAA TGGTCCTCTC TTTCCACAAA ACATTGGCTG TTGGGTTATT AGTCGTCAAC 
GATTAA
 
Protein sequence
MPIPLEKQNK ERRQKILTCS LDLFIEKGYY NTSIRDIIAL SEVGTGTFYN YFVDKEDILK 
NLLEDFAKQI ISSISEYYLV EKDLYERFIE TKRLTMEVFA QNETLSEIYS RVAGSSAPID 
QCLKQFEDRL LEFYSRNIEY GIKKGVFKNV PVSPIAHSIL AIEKFSLYKW VVLKAITKEE 
MIEMVLSFHK TLAVGLLVVN D