| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5317 |
|---|
| Symbol | |
|---|
| ID | 5195724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009507 |
|---|
| Strand | - |
|---|
| Start bp | 214522 |
|---|
| End bp | 215295 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640579244 |
|---|
| Product | RES |
|---|
| Protein accession | YP_001260192 |
|---|
| Protein GI | 148550753 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.140146 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAG GCGCCAAGTC CGGGCCGACA GGCTCTCGGC CCGCCAAGGC TCCGACGCGG
AAGAGGACGC TTGCTGCCCT TCCCGCCTCC CCTTTAGCCC CCTCCGCTCC GGCGAGTGCC
GCTCCTTCGC GCACTATTGC CACGCCGCCA GATAATCTTG ATGCCCTCGT CAAGCGGACG
AGCTGGCCTG CGGACGTGAC CATCCATCGC ATCCATCCCG ATGAATATGC GCCGGATGCC
TTCAACCCCG GTCCACACGG CAACGCGCGC TTCAGTCCGC TCCGCAATGC CGCCGGCAAT
GCGATCCCTA CCCTCTATGG CGGCACGACG CTCGAATGCG CCGCCATGGA AACGGTCTTC
CACGATGTGC CTCATGCGCC GGGACTGAAG ACCATCGCGA AACGCAAGCT CAGGAAGCAT
CGTTATTCCA GATTGCAACC CGCCGCGGAC CTCAGGCTCG CCGATCTCGG CAGCGCCGCG
CTGCGCAAGC TTGGTGTTCC GCGGGTCGAT CTCATCGAGA GCGACAAGGA TATCTATCCG
CAGACCCGCG CCTGGGCGGA GGCCATCCAT GCCCAGTGTC CGGACGTGCA GGGCCTGGGC
TGGGTATCGC GTCAGGATGA CAGCGCGCGG GCCCTCATTC TGTTCGGCGA CCGGCTGGCG
CCCGATCCAT TCAGCAGCGT CGAAGCGCCG GTCGACATCG TCGCCGATGC CGACACCTTC
ACTGCACTCA TCGAGCTCGC CGACATCATC GGGGTGAAGA TCACCGGCAA ATAG
|
|---|
| Protein sequence | MAKGAKSGPT GSRPAKAPTR KRTLAALPAS PLAPSAPASA APSRTIATPP DNLDALVKRT
SWPADVTIHR IHPDEYAPDA FNPGPHGNAR FSPLRNAAGN AIPTLYGGTT LECAAMETVF
HDVPHAPGLK TIAKRKLRKH RYSRLQPAAD LRLADLGSAA LRKLGVPRVD LIESDKDIYP
QTRAWAEAIH AQCPDVQGLG WVSRQDDSAR ALILFGDRLA PDPFSSVEAP VDIVADADTF
TALIELADII GVKITGK
|
|---|
| |