| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5010 |
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| Symbol | |
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| ID | 5195924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 127422 |
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| End bp | 128096 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640579445 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001260393 |
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| Protein GI | 148550963 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 0.417776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.129751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATCCTCG AGCTCGCAAC CGTGGTCGGA CTGGCGCAGC AATGCGCACC ATCGGTTGCG
GTCGAAACGC TGGTGTCAGT TGTCCACACC GAGAGCCATT TCAATCCCTA CGCGATCGGC
GTGAATGCCA AGGGGGTGCC CGCACCCAAT CCCAGCGATC GGGCATCGGC CGCCGCAGCC
GCGCGATCGC TGATTGCCCG CGGCTACAAC ATCGATCTGG GTCTGGGGCA AATCAACAGC
GCAAATCTGA AGTGGCTTGG CCTGTCGGTC GACGACGCCT TCGATCCCTG CCGTAATCTC
GCCGCAGCCG CACGCGTGCT GGCTTCCAAC TATCTGAGCG TTGCGCGCTC CAGCCCTTCT
ACAGAGGTGG CCATCGCGAC CGCCATGTCG ATGTACAATA CGGGCAGTCG TTCGCGCGGA
TTCGGAAACG GCTACGTCGG CCGCGTCTAC GCGTCGTCGA GCATCGTCGT GCCGGCGATC
AGGCGTAGAG CGATGCCAGA ACCCGCTGCT TTGCCCGAGC CGGTGAATTT GGAACCCAAA
GTCACGCAGC CGTCGGCGGT TGTTCGCTTG CAGCGCGTCC GGGACGCTTG GGACACCACT
GCGGGCGCGC AGACAGCATC ATTGATGGTC TTTGGGGGGG CATCCAACAG TTCACCGAAA
GGACAATCCG AATGA
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| Protein sequence | MILELATVVG LAQQCAPSVA VETLVSVVHT ESHFNPYAIG VNAKGVPAPN PSDRASAAAA
ARSLIARGYN IDLGLGQINS ANLKWLGLSV DDAFDPCRNL AAAARVLASN YLSVARSSPS
TEVAIATAMS MYNTGSRSRG FGNGYVGRVY ASSSIVVPAI RRRAMPEPAA LPEPVNLEPK
VTQPSAVVRL QRVRDAWDTT AGAQTASLMV FGGASNSSPK GQSE
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