Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4566 |
Symbol | |
ID | 5196591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 5024511 |
End bp | 5025782 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640584119 |
Product | hypothetical protein |
Protein accession | YP_001265042 |
Protein GI | 148557460 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.524396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA CGTCCCGTTT TGCGCTCGTC GCGGCGCTTG GCGTTGCCGT CGCCGCGGTG GCGCCGGGTA CCCCCGCCTT TGCCAAGAAG AAGGATGAGG CCGCCGCGCC CGCGCTCAAG ATCGGCGAGG CGATCCGCAA GCCGCTCGCC GAGGCCGACA CCGCGATCAA GGCCAAGAAC CTCCCGGCCG CCGACGCCGC GCTGGCGCAG GCCAAGCAGC TCGCCAAGAC TCCCGAGGAG CAATATGTCG TCGCCCAGTA CGGCCTCAAC GCCGCCCAGG CGAGCGGCGA CCAGGCCCGG CTTTCGACCG CGCTCGACGA GCTGATCGCG ACCGGCGAGG CCGCCAACCA GCTCAACGAC GATGCCCGCT CCAAATATTA CTGGTTCCAG GGCCAGTTCG CCTACCAGGC GAAGAACTAT GCCAAGGCCG AGGCTTCGCT GTCGCGCGCC ATCGCCGCCG GCAGCACCGA GGCGGACGCC TATGCGATCC TGGCCGACGC CCAGTCGCGC AACGGCAAGA CCACCGAGGC GCTGGCGACG CTCCAGAAGG TGATCGACGC CAAGGCCGCC GCCGGTCAGG CCGCGCCCAG CGAATGGTAT GGCCGCGGCG CCGACATGGC CTCGCGCGGC AAGCTGCCGA ACCAGTTCGT CAAGATCACC ACCGCCTGGC TCACCGCCTA TCCGGTCAAG CAGAACTGGC ATGACTCGCT GTTCATCTAT CGCCAGATGG CCGGCCTGTC GGGTGACGTC GATCTCGACC TGCTGCGCCT GTCGCGCGCG GCCGGCGTGC TGCCGCTGTC GGCGCAGTCC AACTATATCG ACTATGCGCT GGCGGTGTAT CTGCGCTTCC CGAACGAGGC GGTCGACGTC CTCAACGAGG GTATCGCGGC GGGCAAGCTG AACCCTTCGA CCAGCCAGAA CACGCGTGAG ATCATCGCCC TGTCGCAGCC GAAGCTGGCG CCGGACAAGG CCTCGATCCC GGCGGCGGTC ACCGCCGCCA ACGGCCCGAA GGCGACCTAC AAGTCGGTGA TGACGACCGC CGATCTCGTC TATGGCTACA AGGACTATGC GAAGGCGGCC GAGCTGTACA AGGTCGCGCT GACCAAGCCC GGCGCCGACG CCGCCCAGGC CAATTTCCGC CTCGGCCTCG CGCTCGCCCA GGCCGGCGAC AAGGCCGGCG CCAAGGCGGC CCTCGACCAG GTGACGACCG GCAACTACGC CGTGCTCGCC AGCTATGCGA AGGTCTGGGC GCAGACCCCG CCGACCTCCT GA
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Protein sequence | MKFTSRFALV AALGVAVAAV APGTPAFAKK KDEAAAPALK IGEAIRKPLA EADTAIKAKN LPAADAALAQ AKQLAKTPEE QYVVAQYGLN AAQASGDQAR LSTALDELIA TGEAANQLND DARSKYYWFQ GQFAYQAKNY AKAEASLSRA IAAGSTEADA YAILADAQSR NGKTTEALAT LQKVIDAKAA AGQAAPSEWY GRGADMASRG KLPNQFVKIT TAWLTAYPVK QNWHDSLFIY RQMAGLSGDV DLDLLRLSRA AGVLPLSAQS NYIDYALAVY LRFPNEAVDV LNEGIAAGKL NPSTSQNTRE IIALSQPKLA PDKASIPAAV TAANGPKATY KSVMTTADLV YGYKDYAKAA ELYKVALTKP GADAAQANFR LGLALAQAGD KAGAKAALDQ VTTGNYAVLA SYAKVWAQTP PTS
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