Gene Swit_4566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4566 
Symbol 
ID5196591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5024511 
End bp5025782 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content68% 
IMG OID640584119 
Producthypothetical protein 
Protein accessionYP_001265042 
Protein GI148557460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.524396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA CGTCCCGTTT TGCGCTCGTC GCGGCGCTTG GCGTTGCCGT CGCCGCGGTG 
GCGCCGGGTA CCCCCGCCTT TGCCAAGAAG AAGGATGAGG CCGCCGCGCC CGCGCTCAAG
ATCGGCGAGG CGATCCGCAA GCCGCTCGCC GAGGCCGACA CCGCGATCAA GGCCAAGAAC
CTCCCGGCCG CCGACGCCGC GCTGGCGCAG GCCAAGCAGC TCGCCAAGAC TCCCGAGGAG
CAATATGTCG TCGCCCAGTA CGGCCTCAAC GCCGCCCAGG CGAGCGGCGA CCAGGCCCGG
CTTTCGACCG CGCTCGACGA GCTGATCGCG ACCGGCGAGG CCGCCAACCA GCTCAACGAC
GATGCCCGCT CCAAATATTA CTGGTTCCAG GGCCAGTTCG CCTACCAGGC GAAGAACTAT
GCCAAGGCCG AGGCTTCGCT GTCGCGCGCC ATCGCCGCCG GCAGCACCGA GGCGGACGCC
TATGCGATCC TGGCCGACGC CCAGTCGCGC AACGGCAAGA CCACCGAGGC GCTGGCGACG
CTCCAGAAGG TGATCGACGC CAAGGCCGCC GCCGGTCAGG CCGCGCCCAG CGAATGGTAT
GGCCGCGGCG CCGACATGGC CTCGCGCGGC AAGCTGCCGA ACCAGTTCGT CAAGATCACC
ACCGCCTGGC TCACCGCCTA TCCGGTCAAG CAGAACTGGC ATGACTCGCT GTTCATCTAT
CGCCAGATGG CCGGCCTGTC GGGTGACGTC GATCTCGACC TGCTGCGCCT GTCGCGCGCG
GCCGGCGTGC TGCCGCTGTC GGCGCAGTCC AACTATATCG ACTATGCGCT GGCGGTGTAT
CTGCGCTTCC CGAACGAGGC GGTCGACGTC CTCAACGAGG GTATCGCGGC GGGCAAGCTG
AACCCTTCGA CCAGCCAGAA CACGCGTGAG ATCATCGCCC TGTCGCAGCC GAAGCTGGCG
CCGGACAAGG CCTCGATCCC GGCGGCGGTC ACCGCCGCCA ACGGCCCGAA GGCGACCTAC
AAGTCGGTGA TGACGACCGC CGATCTCGTC TATGGCTACA AGGACTATGC GAAGGCGGCC
GAGCTGTACA AGGTCGCGCT GACCAAGCCC GGCGCCGACG CCGCCCAGGC CAATTTCCGC
CTCGGCCTCG CGCTCGCCCA GGCCGGCGAC AAGGCCGGCG CCAAGGCGGC CCTCGACCAG
GTGACGACCG GCAACTACGC CGTGCTCGCC AGCTATGCGA AGGTCTGGGC GCAGACCCCG
CCGACCTCCT GA
 
Protein sequence
MKFTSRFALV AALGVAVAAV APGTPAFAKK KDEAAAPALK IGEAIRKPLA EADTAIKAKN 
LPAADAALAQ AKQLAKTPEE QYVVAQYGLN AAQASGDQAR LSTALDELIA TGEAANQLND
DARSKYYWFQ GQFAYQAKNY AKAEASLSRA IAAGSTEADA YAILADAQSR NGKTTEALAT
LQKVIDAKAA AGQAAPSEWY GRGADMASRG KLPNQFVKIT TAWLTAYPVK QNWHDSLFIY
RQMAGLSGDV DLDLLRLSRA AGVLPLSAQS NYIDYALAVY LRFPNEAVDV LNEGIAAGKL
NPSTSQNTRE IIALSQPKLA PDKASIPAAV TAANGPKATY KSVMTTADLV YGYKDYAKAA
ELYKVALTKP GADAAQANFR LGLALAQAGD KAGAKAALDQ VTTGNYAVLA SYAKVWAQTP
PTS