| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4330 |
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| Symbol | |
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| ID | 5197704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4773854 |
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| End bp | 4776196 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583884 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264808 |
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| Protein GI | 148557226 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.971491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGGCT TCAGCGCTAG GGCATTCGGG AGATATTTGG TGTCGGTCGG GATGGTCGCG
CTCGCCGCGC AGGCGCAGGC GCAGACCCCG CCCCAGCCGG AGGCTGCATC GGACGAGATC
ATCGTCACCG CGCAGCGGCG CGTGGAACGG CTGCAGGACG TGCCGATCTC CGCGAGCGTG
ATCAGCGGCG CCGACATCCA GAAGAAGAAC ATGACCTCGC TCGAGCAGCT CACCGCCGAG
ACGCCGGCCG TGGTCGTGAC CAAGGGCGGC GCCGCCAACC GCCTGTCGAT CCGCGGTGTC
GGATCGGGCG ACAACAACCC GCTGTTCGAG CAGTCGGTCG CGACCTTCAT CGACAATGTC
TACCAGGGCC GCTCGCGCTC GAACGGCGCC TCCTTCCTGG ACATCGCCCG GGTCGAGATA
TTGAAGGGGC CGCAAAGCGT CTATTTCGGC AACAACTCGA TCGCGGGCGT GCTCAACATC
GTCACCCGCG ATCCGGGCGA CCGCCTCGAA GGCTATGCCC GAGGCTCCTA TAATTTCGAC
TTCAACGCCG CGACGCTCGA GGGCGCGGTC GGCGGACCGA TCAGCGACAC GCTCGGCATC
CGGGTGGCCG GCGTCGCCAC GCGCGGCAAC GGCTATATCC GCGACGAGGG GCTGGGCGGC
CTGCGCATCC CGCGTGTCCG CTCCTATGCC GGCCGCGCCA CGCTGCGCTG GCAGCCGATC
GAGGAACTGA CCTGGACGGT GAAGGCCAGC GCCGAGCATA GCCGCCAGAC CGGCGCGATC
GCCGACGAGA TCGCCTATTG CCCGCCCGAT CCCCTGTTCA CCGCCGGCGC GACCGGAAGC
TGCCTGGTCG CGCTCAACCG CGGCGAGGAC GTCAAGCTCA ACCAGGTCCG CTCGCACAGC
CCGGGCCAGG GCATCGACCT CGACACGCAG AGCTATGTGT CGACCCTCGC CTATGACGCC
GGTCCGCTCG AACTGTCGGC GATCACCGCC TACAGCCACA CCAAGTACAA CCAGCGGCTC
GACACCGACG GCACCAGCGC GACGCTGACC CACTTCACCA CGCCCGAGCG CTTCTCGCAG
TTCAGCCAGG AGTTCCGGAT CTCGACGCCA CGCGACAGCT GGGTCGCGCT CGATGCCGGC
GCCTATTTCA ACCGGGAGTA TATCCATGGC GGCGTGAACT ATAATTTCAC GTCGCTCAAC
AGCCGCCTGA CCGGCGCCTT CGCCGCGCTC GCGCCGCTCG GCTCGTTCGG CCAGTATGAC
GATTACCGCC AGCGGTCGAA GACCTACGCG ACCTATGCGC ATCTGACCTT CCGCCCGACC
GAGCAACTGA CCCTCAGCGT CGGCGGCCGC CAGAGCTGGG TCGACAAGTC GATCGTGCTC
AACCAGGGCT TCGGCATCGC CGCGAACAGC TTCGGCGACA TCACCCCCTA TCCCGACGCG
ACGCTCCAGG CGCTCGGCGA CCGCTTCGGC ACCGCGGCGG GGCTCGGCGT CGCCGCCGTG
CGCAACGCCC GCCGGCTGGA CGCGCATTTC AGCCCGTCGG CGGTGCTGTC CTACCAGCCG
ACCCCGGCGC TCAACCTCTA CGCCAAATAT ACCAACGGCT TCAAAGCCGG CGGCTTCAAC
GGGCTGGAGC ATACCGGCGC CGCGGCGGCC CTGTCCTTCG GCCCCGAATA TGTCGACGGC
TATGAAGCGG GCATCAAGAG CCAGTGGTTC AACCGCCGCC TGACCCTGAA CGTCGCGGTG
TTCCGCAACG ACTTCAGCGA CCTGCAGGTC TCCGCCTCGC AGAATTTCGG GGTCGGCGTG
GTCAACGTCA TCGGCAATGC CGGCGGCGCG CGCGCCCAGG GCATCGAGGT CGAGGGCCGC
TGGCGGATCA CCAGCGAACT GACGACCGGC CTCAGCCTGA CGCTGCTCGA CTCCAAATAT
ACCGACTATC GCAACGCCGC GGGCAACGCG CTCGACGTGC AGCAGGGCCG CCCCTTCGTC
GACCTGACCG GCACGCGGAC GCGCTATGCG CCCAAATATA GCGGCAACTA CACGCTCGAT
TATCTGGCGC CGATCACCAG CGGGCTCAAG CTGCACCTGA ACGGCAACGC CTTCTTCACC
GGCAAGTATA ATTTCTCGAA CAACAACGAT CCGTTCCTCG CCCAGGACGC CTATGTCCGG
CTGGGGGCGA TCATCGGTCT CGCCGATGCC GACGATCGCT GGGAGGTGTC GCTGGTCGGC
AAGAACCTGA CCGACAAGCT GGTCCGGATC TTCGGCACCA ACCTCGCCCA GTCGCGCGGC
TCCTATCTGA TCGGCACCGA CGAACCGCGC AGCATCGCCA TCCAGGCGAA CCTGCGCTTC
TGA
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| Protein sequence | MSGFSARAFG RYLVSVGMVA LAAQAQAQTP PQPEAASDEI IVTAQRRVER LQDVPISASV
ISGADIQKKN MTSLEQLTAE TPAVVVTKGG AANRLSIRGV GSGDNNPLFE QSVATFIDNV
YQGRSRSNGA SFLDIARVEI LKGPQSVYFG NNSIAGVLNI VTRDPGDRLE GYARGSYNFD
FNAATLEGAV GGPISDTLGI RVAGVATRGN GYIRDEGLGG LRIPRVRSYA GRATLRWQPI
EELTWTVKAS AEHSRQTGAI ADEIAYCPPD PLFTAGATGS CLVALNRGED VKLNQVRSHS
PGQGIDLDTQ SYVSTLAYDA GPLELSAITA YSHTKYNQRL DTDGTSATLT HFTTPERFSQ
FSQEFRISTP RDSWVALDAG AYFNREYIHG GVNYNFTSLN SRLTGAFAAL APLGSFGQYD
DYRQRSKTYA TYAHLTFRPT EQLTLSVGGR QSWVDKSIVL NQGFGIAANS FGDITPYPDA
TLQALGDRFG TAAGLGVAAV RNARRLDAHF SPSAVLSYQP TPALNLYAKY TNGFKAGGFN
GLEHTGAAAA LSFGPEYVDG YEAGIKSQWF NRRLTLNVAV FRNDFSDLQV SASQNFGVGV
VNVIGNAGGA RAQGIEVEGR WRITSELTTG LSLTLLDSKY TDYRNAAGNA LDVQQGRPFV
DLTGTRTRYA PKYSGNYTLD YLAPITSGLK LHLNGNAFFT GKYNFSNNND PFLAQDAYVR
LGAIIGLADA DDRWEVSLVG KNLTDKLVRI FGTNLAQSRG SYLIGTDEPR SIAIQANLRF
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