Gene Swit_3845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3845 
Symbol 
ID5198345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4223796 
End bp4224923 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content68% 
IMG OID640583400 
Productpeptide chain release factor 2 
Protein accessionYP_001264328 
Protein GI148556746 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCG AAGCGCAAGC CAGTGTCGAT CAGATCAACC AGGCGATGGC GCTCGTCCGC 
CGCTTCCTGG ATTGGGACCG CGCGCTCCGC CGGCTCGACG AGCTCAACAA CCGGGTCGAG
GACCCGAAGC TGTGGGACGA CGCCAAGGCC GCGCAGGAGG TGATGCGCGA GCGTCGCCGG
CTCGACGAGG CGGTCTCGGC GGTCAAGGCG ATCGAGCAGG AGCGCGACGA CACGATCGAG
CTGATCGAGC TGGCCGAGGC CGAGGACGAC ACGGCGCTGG TCGACGACGG CGTCCAGGCG
CTCGCCGCGC TCGCCGAGCG GGCCGAGAAG GACAAGATCG GCGCGCTGCT GGCGGGCGAG
GCCGACGCCA ACAACACCTA TATCGAGGTC AATTCGGGCG CCGGCGGCAC CGAGAGCCAG
GACTGGGCCG GCATGCTCCA GCGCATGTAC GCCCGCTGGG CCGAGCGCCA CGGCTACAAG
GTCGAGCTGA TCGATTTCCA CGCGGGCGAG CAGGCCGGCA TCAAGTCCGC GACCCTGCTG
GTGCGCGGCG AGAACGCCTA TGGCTATGCC AAGACCGAGA GCGGCGTCCA CCGCCTGGTC
CGCATCAGCC CCTATGACTC GGCGGCGCGC CGGCACACCA GCTTCGCGTC GGTCTGGGTC
TATCCCGAGG TCGACGACGA CATCGACATC GAGGTGCTCG AGAAGGACCT GAAGATCGAC
ACCTACCGGT CGTCGGGCGC GGGCGGCCAG CACGTCAACA CCACCGATTC GGCGGTGCGC
ATCACCCATG TCCCGACCGG GATCATCGTC GCCTGCCAGA ACCAGCGGTC GCAGCACAAG
AACCGCGCCG AGGCGATGAA GCAGCTCAAG GCGCGCCTCT ACGAGCAGGA GTTGCAGAAG
CGCGAGGCCG AAGCGATGGC GGGCTATGCC GCCAAGACCG AGATCGGCTG GGGCCACCAG
ATCCGCTCCT ACGTCCTCCA GCCCTATCAG ATGGTGAAGG ATCTCAGGAC CGGCACCACC
TCGACGGCGC CGTCGGACGT GCTCGACGGC GATCTCGACC GCTTCATGGC TGCCGCGCTG
TCGCAGCGCG TGACCGGCGA GACGGTCGAG GTCGAGGACG TCGACTGA
 
Protein sequence
MRAEAQASVD QINQAMALVR RFLDWDRALR RLDELNNRVE DPKLWDDAKA AQEVMRERRR 
LDEAVSAVKA IEQERDDTIE LIELAEAEDD TALVDDGVQA LAALAERAEK DKIGALLAGE
ADANNTYIEV NSGAGGTESQ DWAGMLQRMY ARWAERHGYK VELIDFHAGE QAGIKSATLL
VRGENAYGYA KTESGVHRLV RISPYDSAAR RHTSFASVWV YPEVDDDIDI EVLEKDLKID
TYRSSGAGGQ HVNTTDSAVR ITHVPTGIIV ACQNQRSQHK NRAEAMKQLK ARLYEQELQK
REAEAMAGYA AKTEIGWGHQ IRSYVLQPYQ MVKDLRTGTT STAPSDVLDG DLDRFMAAAL
SQRVTGETVE VEDVD