| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3699 |
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| Symbol | |
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| ID | 5197362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4062127 |
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| End bp | 4063143 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583255 |
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| Product | P-type conjugative transfer protein TrbG |
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| Protein accession | YP_001264183 |
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| Protein GI | 148556601 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACA CGCCATTTCG CCGTTCCGCC TCGGCGGTCC TGCTTGTCTC CGCCACCGCG
CTCGCCGGCT GCGCCACCAC ATCGGCGAAG CCGCCCGCGA TTCGCTATGA CGACCCGCCG
CGCGAGATCG CGGCGACGCC GGCCGCGGAA CCACTCCGCG CCGTCGAGGT GGTGACGATC
CCCGAACCCC TGCCGTTCCC CGGCCAATTG AAGCCGGTCG CGGCCGGGGC GGCGACTGCC
GAGCACGCCG ATCCACGCAG GCGCGTCGGG GCCGCCAACG CCGCCGCCCG CGTGCAGCCG
GTGCGTGACG GTTTCCTCAA CGCCATCCAG CAATATCCCT GGACCGACGG AGCGCTCTAT
CAGGTCTATG CCGCGCCCGG CCAGGTGACG GACATCGCAT TGCAGGAAGG CGAGAAGCTC
GTGGGGCCGG GGCCGGTCGC GGCCGGCGAC ACCGTGCGCT GGATCATCGG CGACACGGTG
AGCGGCGGCG GCGCGACGGC CCGCGTGCAT ATCCTCGTGA AGCCCACGCG GCCCGACCTT
TCCACGAACC TCGTCATCAA CACCGACAGG CGGACCTATC ATCTGGAGCT GCGCGCGACG
GCTTCGACCT ACATGGCGTC GGTCTCGTGG ACCTATCCGC AGGACCAGCT CATCGCGCTG
CGCAGCGCCA ATACCGCAGC CGCCGCCTCG GCCCCCGTCG CGACCGGCCT CGACCTCGCG
GCGCTCAATT TCCGCTACCG GATCGAGGGC GACCGCGTGC CGTGGAAGCC GGTGCGCGCT
TTCGACGATG CCGCCCAGGT GTTCATCGAG TTTCCGGCCG GGATCTCGCA GGGCGAGATG
CCGCCGCTAT TCGTGACCGG CGCGGCCGGT GATGCCGAGC TGGTCAATTA CCGCGTGCAG
GGCCGCTACA TGGTGGTGGA CCGGCTGTTC GCCGCCGCCG AGCTGCGCCT GGGCGACCGG
CGCAGCGAGC AGCGCATCCG CATCGTGCGC GACGACGGAC GCAGGGGGCG GCCGTGA
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| Protein sequence | MTHTPFRRSA SAVLLVSATA LAGCATTSAK PPAIRYDDPP REIAATPAAE PLRAVEVVTI
PEPLPFPGQL KPVAAGAATA EHADPRRRVG AANAAARVQP VRDGFLNAIQ QYPWTDGALY
QVYAAPGQVT DIALQEGEKL VGPGPVAAGD TVRWIIGDTV SGGGATARVH ILVKPTRPDL
STNLVINTDR RTYHLELRAT ASTYMASVSW TYPQDQLIAL RSANTAAAAS APVATGLDLA
ALNFRYRIEG DRVPWKPVRA FDDAAQVFIE FPAGISQGEM PPLFVTGAAG DAELVNYRVQ
GRYMVVDRLF AAAELRLGDR RSEQRIRIVR DDGRRGRP
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