| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3695 |
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| Symbol | |
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| ID | 5197358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4059031 |
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| End bp | 4059747 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583251 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_001264179 |
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| Protein GI | 148556597 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGAT TCCCCCTGCG CCGCGCCATC CTGGCCGGCG TCCTCGCCAG CGCGGCCGTC
GTGCCGATGA TCGCGCCCAT GCCGGCCTAC GCGCAATTCG GCGGCATCGT CTATGACCCG
ACCAACTATG CGCAGAACGT GCTGACCGCC GCGCGGTCGC TCCAGCAGAT CAACAATCAA
ATCCAGCAAA TCCAGAACCA GGCGACCAGC CTCATCAACG AGGCGCGCAA CCTCGCCAGC
CTGCCGCTCT CGACGGTGAG CACGCTCCAG CAGCAGATTC AGCAGACGCA GCAACTGCTC
GGCCAGGCGC AGCGCATCGC CTTCGACGTG CAGGACATCC AGCAGGCGTT CAACGGCCGC
TACAAGGGCG CGGCGCTGAC CGGCGATCAC GCGCAGATGG TCGCCAACGC CAATGCCCGC
TGGGAGGATA GCGTCGGCGC CTTTCAGGAT GCCTTGCAGG TGCAGGCCGG CGTCGTCGGC
AACATCGAAG GCGCCCGCAC GACGATGGAC AGCCTGGTCT CGGCCAGCCA GTCCGCGACC
GGCGCGCTTC AGGCGACGCA GGCCGGCAAC CAACTCCTCG CGCTGCAATC GCAGCAGCTC
TCGGACCTGA CCGCCGCCGT GGCGGCGCAA GGCCGGGCGC AGGCGCTGCA ATCCGCCCGC
CAGGCGGCCG AGGAGGCCGA AGGGCGCGAG CGGTTCCGCC GCTTCATGGG CAACTGA
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| Protein sequence | MTGFPLRRAI LAGVLASAAV VPMIAPMPAY AQFGGIVYDP TNYAQNVLTA ARSLQQINNQ
IQQIQNQATS LINEARNLAS LPLSTVSTLQ QQIQQTQQLL GQAQRIAFDV QDIQQAFNGR
YKGAALTGDH AQMVANANAR WEDSVGAFQD ALQVQAGVVG NIEGARTTMD SLVSASQSAT
GALQATQAGN QLLALQSQQL SDLTAAVAAQ GRAQALQSAR QAAEEAEGRE RFRRFMGN
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