Gene Swit_3600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3600 
Symbol 
ID5199213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3959700 
End bp3960491 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content71% 
IMG OID640583155 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001264084 
Protein GI148556502 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.465464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CGAACCTGCT CGTCGAGCGC GAGGGCGCGG TCGCGAAGCT CACCCTCAAC 
CGCCCCGAAG CGGCGAACGC CCTCGACATC GACCTCGCCC GCGCGCTGGT CACCGCCGCG
CTCGACTGCG AACATGATCC GGCGATCCGC TGCGTCACGC TGACCGGCGC GGGCCGGCTG
TTCTGCGCGG GCGGCGACGT CGCCTATATG GCCGGCGCGG GCGACAAGAC CGCCGCCGCC
ACGGCCGAAC TCGCCAGCAC CCTGCATCTG GCGATGTCGC ACCTCGCCCG GATGAGCAAG
CCGCTGGTCA CCATCGTCAA CGGCCCCGCC GCCGGCGCGG GCTACGGCAT GGCGCTGAGC
GGCGACGTGG TGCTGATGGC CCGCTCGGCC AGCTTCACGC CGGCTTATGG CATGCTCGGC
GTGTCGCCCG ACGGCGGACT GACCTGGCTG CTGCCGCGCC TCGTCGGTCT GCGCCGCGCG
CAGGAGATCA TCCTCACCAA CCGCAAGGTC GGCGCCGAGG AGGCGGAGGC GATGGGCCTG
ATCACCCGCG CCGTCGACGA CGACGCCCTC GCCGCCGAGG GCGCCGCGAT CGCCGCGAAG
CTGGCGGCGT CCGCCACATA TGCGATCGGT TCGGTCCGCG CCTTGCTTCT CGATTCCTAC
GCCAATAGCT GGGAGACGCA TCTCGAACTG GAAGCGCGCG GGATCGCCTC CGCGATCTCC
GGCCGTGACG GACGGGAGGG CGTCGCAGCC TTCCTCGCCA AGCGCAAACC CGATTTCACA
GGTGGCCGAT GA
 
Protein sequence
MSAANLLVER EGAVAKLTLN RPEAANALDI DLARALVTAA LDCEHDPAIR CVTLTGAGRL 
FCAGGDVAYM AGAGDKTAAA TAELASTLHL AMSHLARMSK PLVTIVNGPA AGAGYGMALS
GDVVLMARSA SFTPAYGMLG VSPDGGLTWL LPRLVGLRRA QEIILTNRKV GAEEAEAMGL
ITRAVDDDAL AAEGAAIAAK LAASATYAIG SVRALLLDSY ANSWETHLEL EARGIASAIS
GRDGREGVAA FLAKRKPDFT GGR