Gene Swit_3156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3156 
Symbol 
ID5196131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3469638 
End bp3470063 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content72% 
IMG OID640582703 
ProductMarR family transcriptional regulator 
Protein accessionYP_001263642 
Protein GI148556060 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.646258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGACG GCACGGGGAA CGGGGACAAG CAGCTCGGCG ACGCCGACTA TGCGGCGCTG 
GCCGCCTTCC GCCATGCGAT CCGCCGCTTC CAGGCGTTCA GCGAGGCGCG CGCGACCGAG
ATCGGGCTGA CCCCGCAACA GCATCAGGCG CTGCTCGCGA TCCGGGGCGC CGCCCCCGGC
GAAGCGACTG TCGGCCATGT CGCCGAGCGG CTGATCCTCA AGCCGCACAG CGCGACCGGG
CTGGTCAACC GGCTCGAGGC GCTCGGCCTG ATCAACCGCG AGACCGCCGG CGACGACCGC
CGCCGCGCGC TGCTGCGGCT GACGCCCAAG GCCTATGGCC TGCTCGGCGC GCTGTCGGCG
ATCCACCGGG AGGAAATCCA GCGGCTAAGG CCGCTTTTCT CGGAGATCTT CGACCAGCTC
GCCTGA
 
Protein sequence
MKDGTGNGDK QLGDADYAAL AAFRHAIRRF QAFSEARATE IGLTPQQHQA LLAIRGAAPG 
EATVGHVAER LILKPHSATG LVNRLEALGL INRETAGDDR RRALLRLTPK AYGLLGALSA
IHREEIQRLR PLFSEIFDQL A