9 homologs were found in PanDaTox collection
for query gene Swit_3112 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009511  Swit_3112  type IV pilus assembly PilZ  100 
 
 		 147 aa  296  5e-80  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.599577 
 
 
-
 
NC_009511  Swit_1515  hypothetical protein  36.78 
 
 		 121 aa  50.1  0.000009  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_0057  type IV pilus assembly PilZ  47.17 
 
 		 149 aa  46.2  0.0001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.509918 
 
 
-
 
NC_013889  TK90_2505  type IV pilus assembly PilZ  37.8 
 
 		 197 aa  45.8  0.0002  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_3968  diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  33.33 
 
 		 887 aa  44.3  0.0005  Sphingomonas wittichii RW1  Bacteria  normal  0.552435  normal  0.160196 
 
 
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NC_008048  Sala_0934  type IV pilus assembly PilZ  32.43 
 
 		 196 aa  42.7  0.002  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.375639  normal  1 
 
 
-
 
NC_008347  Mmar10_1075  type IV pilus assembly PilZ  38.18 
 
 		 207 aa  42.7  0.002  Maricaulis maris MCS10  Bacteria  normal  0.0474711  normal  1 
 
 
-
 
NC_007794  Saro_0166  hypothetical protein  39.22 
 
 		 218 aa  42  0.003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_1423  hypothetical protein  27.96 
 
 		 121 aa  40  0.009  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.223606  n/a   
 
 
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