| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2652 |
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| Symbol | |
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| ID | 5201016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2932278 |
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| End bp | 2933558 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640582206 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001263146 |
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| Protein GI | 148555564 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0561066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGCG CCTTCCGCGG AGATACGAAT GGGTTTAGAG GCGTGACGAT CAGCGGCCCG
CTACCTCGGA CAAGGACGCG CGTCCTGCGG AATTTTTCCT CGCTGATGGT GATCAAGGGG
CTGAATCTGA TCGCTCCCGT CATTGCCTTG CCCTACATCT TGCATACGGT TGGCCTTGAA
AATTACGGTC ACATTGCGTT TACGACAGTG ATCGCAACCT TCGCGGGATC CATTATCCAA
TATGGGTTCT CGTTAACGGG GGTGAAGGCG ATAGCTTCGG TGCGTGAGGA ACCGAACCTT
CTAGCTCACA TCTTCTGGTG CAATTTTCTG GCAAGCCTGC TGATCGGGTT GACAGTGATA
GCTGTCCATG TGGGGCTCGT TTTGAGTGTG CCTTCTTTCC GTGAAATGTG GGCACTACAT
ATCGGTGCGA TCCTGCTTGC GGCAGGGAAC GCGTTGGTCC CCCATTGGCT GTTTCTTGGC
TTGGAACGGA GCTACTATGC CGCCGTTGGC ACTTTTATCG TTAGATTTTC CTATATCTTG
CTACTAATTT TGTTTGTTCG GACCCCGCAG GATTATGTGC TGATAAATTT CCTTGGCGCG
GGAATGGCAT GGCTAAACAT TATACTCGCT CTCGTAGTTG TGATCGGTGT ATTCCGATTG
TTGCCGATCC GTATCGGATA CCGAGAAATT ATTTATACTA TCCGTAACGG ATTTTCCTCT
TTTCTGTTAG ATTGGACGCC GAATCTCTAT AATTCGGCAT CGATCATGCT GCTTAGTTTT
AATGTCTCAC CTATAACATT AGGTGCCTTC AACGCGGCTA ATACGGTAGT GACGCTTGTG
ACCTCTCTGG GGCAGCTATT AGCCAACGCT TTCATGCCAA TTCTTTCCAC CAGCTTTAGT
TTGCACAGAA TATCTTCACG CGTTCTTGTT ATTACCGGCT TGCTGGTGGC GACTCTGGTC
TTTGCGTTCG CCCCTTTTGG GGCTGCGTTG CTGGCTGCTA ATGGCCAGGA TATGATTGAG
CGAAACCTCT TTTATCTTGC TTTCAGTATT CCGTTTGCAT TTGGATATTA TGCTTATGGT
TACAATTATG TTGCCCTAAC CGAGAAGCGT GGGCAGGCTG GTTATGTGGT TCTTTTAATT
TCGATTCTAG GCATTCTGCT CTCTTTTTTT ATTGTGCCAG CTTTGGGATC TGTAGGGGTC
GCTATTATAC TATTCCTAGG CCGTGGGAGT ATGTTTGCTA TGTCTTATGT TATCTATCGC
AGATTTGGAT ATTCTGCCTA A
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| Protein sequence | MPRAFRGDTN GFRGVTISGP LPRTRTRVLR NFSSLMVIKG LNLIAPVIAL PYILHTVGLE
NYGHIAFTTV IATFAGSIIQ YGFSLTGVKA IASVREEPNL LAHIFWCNFL ASLLIGLTVI
AVHVGLVLSV PSFREMWALH IGAILLAAGN ALVPHWLFLG LERSYYAAVG TFIVRFSYIL
LLILFVRTPQ DYVLINFLGA GMAWLNIILA LVVVIGVFRL LPIRIGYREI IYTIRNGFSS
FLLDWTPNLY NSASIMLLSF NVSPITLGAF NAANTVVTLV TSLGQLLANA FMPILSTSFS
LHRISSRVLV ITGLLVATLV FAFAPFGAAL LAANGQDMIE RNLFYLAFSI PFAFGYYAYG
YNYVALTEKR GQAGYVVLLI SILGILLSFF IVPALGSVGV AIILFLGRGS MFAMSYVIYR
RFGYSA
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