| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2505 |
|---|
| Symbol | |
|---|
| ID | 5198201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2779962 |
|---|
| End bp | 2780732 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640582053 |
|---|
| Product | hydroxyacylglutathione hydrolase |
|---|
| Protein accession | YP_001263002 |
|---|
| Protein GI | 148555420 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTGC TCGCCACCGC GACCGGCAAC GCCTTCGCCC ATGTCGCCTA TCTCGTCTGG
TGCCCGGACA GCGGGGAGGC AGCCGCGATC GATCCCTATC AGCTCGACCT GGTGCTGGAG
ACGGCGCGGG CCAACGGCCT GACCATCACC CGCATCGTCA ACACCCATGA GCATTGGGAC
CATGCCGGCC GCAACGCGCA GCTGCGCGAG GCGACCGGCG CCGAGGTGCT GGCGCCCAGG
GCCGCCGCCG GGGTGATCGA GACGGTCGAC CACATGCTGG CGGAGGGCGA CGAGATCGTC
GTCGGCACAA GCTGCCGGCT GCGCGTGATC GAGATGCCGG GCCACACCAT GACCCATGTC
GGCCTGCTCG GCGAGGGCGC GGACCGGGGC GAGGACGAAC CCTTCCTGCT GTGCGGCGAC
ACGCTGTTCG GCGCCGGGGT CGGCAATGTC GGCCATGGCG GCCACGGCCC GACCCTGTTC
GCGACGGTCG ACCGGCTGCG CCGGACGCTC GACCCGCGCA CCCGCCTCTA TCCGGGCCAC
GACTATCTCG CCCGCAACCT CGGCTTCACC CTGCGGCACG AGCCCGACAA CCGGGCCGCG
CGGGCCTTGC TCGAAACGAT CGGCCCGGCC CCGCGCTTCA CCACCATGGC CGAGGAGGAG
GAGATCAACC TGTTCTTCCG GCTCGACCAG CCGGCGGTGC GGGCGGCGTT CGGCGAGGCC
GACCGCGAGG CGCGGTTCCT GGCGATCCGC CGCGCGCGCG ACCTGTGGTG A
|
|---|
| Protein sequence | MPLLATATGN AFAHVAYLVW CPDSGEAAAI DPYQLDLVLE TARANGLTIT RIVNTHEHWD
HAGRNAQLRE ATGAEVLAPR AAAGVIETVD HMLAEGDEIV VGTSCRLRVI EMPGHTMTHV
GLLGEGADRG EDEPFLLCGD TLFGAGVGNV GHGGHGPTLF ATVDRLRRTL DPRTRLYPGH
DYLARNLGFT LRHEPDNRAA RALLETIGPA PRFTTMAEEE EINLFFRLDQ PAVRAAFGEA
DREARFLAIR RARDLW
|
|---|
| |