Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2494 |
Symbol | |
ID | 5197780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2769120 |
End bp | 2770244 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640582042 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001262991 |
Protein GI | 148555409 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.225042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCACTA TCATCATCTA TGTTCACGAT CTGCGGTCGA GCGGGGTGGT CCGCGACGCG ATGATGCTGG CCGATCATAT CGCCGGCCGT CACGACGCCA TCCTCGTCGC CGGCCATGGC GAGGGCTTCT TCCGCGAGGA GGCCGAACGG GGCCGCTACC GGCTGGTGAT CCTGAAGGAC CGGCCGAGCC CGGCCGCCTC GCGCATCACC GCCGCGCAGC CGCTGCGCCG CTGGCTGCGG CACCAGCCGC CGGCGGTGCT GCTGTCGATG GGCAATCACG GCCATGCGAC CGCCTATCTC GCCTGTCGCG GGCTCGGCCA TGTCCGCCGC ATCTACCGGA TCAGCAACGA GGTGACGCGC GGCGACGGCC TGCGCGGCGC CTTGCGGATG CACTGGATGG AGCGGCTGAT CGCCGACGCG GCGCGGATCG CGATCGTCGG CGCCGCGCTG CGCCGCGCGC CGATGCTGGC CCGCGCGATC GGGCGCGGCC AGGCGATCGA GATAGCGAGC GGGGTCGACG GCGATCATGC GCGGGCGATG GCGGCGGCGC CCGTGCCGCA CCCCTGGCTC GATGCGGAGG TGCCCGTCGT GCTCGGCATC GGCCGGCTGC GCCCGCAGAA GAATTTCGAC CTGCTGATCG AGGCGGTCGG CATCGCCCGC GCCGAACGGC GGCTGCGGCT CGTCATCCTC GGCGACGGCA CCGGGGAGGA ACGCAGCCGG CTCGAACAGC TCGCCGCGCG CGCCGGGCTG GGCGAGGATT TCCTGCTCGC CGGCGAAAGC AGCAACGTCT TCGCCTGGGC GGCGCGCGCG GGCGCGTTCG TGCTGCCGTC GCGCTGGGAA GGCTCGTCGG TCGCGCTGCT CGAGGCGATG GCGGTCGGCG TCCCGGTGAT CGCCTCGCGC CTCGCCGGCG ACGCCGCGCA GGTGCTCGAC GAGGGCCGCC ATGGCCTGCT CGTCGGCGGC GAGGACCGCA CCGAGCTGGC GCGCGCGATC CTCGTCCAGC TCTCGGGCTA TGCGGTGCGG CCGGGCGACC GCGCGCGCGC CTATGGCCTG CCGGGCGCCG CCTATCTCGA CCTGGTCGAG GCGGTGATGG CCGAAATGGA CGGCACGGCG CGGGCCGCCG CATGA
|
Protein sequence | MGTIIIYVHD LRSSGVVRDA MMLADHIAGR HDAILVAGHG EGFFREEAER GRYRLVILKD RPSPAASRIT AAQPLRRWLR HQPPAVLLSM GNHGHATAYL ACRGLGHVRR IYRISNEVTR GDGLRGALRM HWMERLIADA ARIAIVGAAL RRAPMLARAI GRGQAIEIAS GVDGDHARAM AAAPVPHPWL DAEVPVVLGI GRLRPQKNFD LLIEAVGIAR AERRLRLVIL GDGTGEERSR LEQLAARAGL GEDFLLAGES SNVFAWAARA GAFVLPSRWE GSSVALLEAM AVGVPVIASR LAGDAAQVLD EGRHGLLVGG EDRTELARAI LVQLSGYAVR PGDRARAYGL PGAAYLDLVE AVMAEMDGTA RAAA
|
| |