Gene Swit_2494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2494 
Symbol 
ID5197780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2769120 
End bp2770244 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content74% 
IMG OID640582042 
Productglycosyl transferase, group 1 
Protein accessionYP_001262991 
Protein GI148555409 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.225042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACTA TCATCATCTA TGTTCACGAT CTGCGGTCGA GCGGGGTGGT CCGCGACGCG 
ATGATGCTGG CCGATCATAT CGCCGGCCGT CACGACGCCA TCCTCGTCGC CGGCCATGGC
GAGGGCTTCT TCCGCGAGGA GGCCGAACGG GGCCGCTACC GGCTGGTGAT CCTGAAGGAC
CGGCCGAGCC CGGCCGCCTC GCGCATCACC GCCGCGCAGC CGCTGCGCCG CTGGCTGCGG
CACCAGCCGC CGGCGGTGCT GCTGTCGATG GGCAATCACG GCCATGCGAC CGCCTATCTC
GCCTGTCGCG GGCTCGGCCA TGTCCGCCGC ATCTACCGGA TCAGCAACGA GGTGACGCGC
GGCGACGGCC TGCGCGGCGC CTTGCGGATG CACTGGATGG AGCGGCTGAT CGCCGACGCG
GCGCGGATCG CGATCGTCGG CGCCGCGCTG CGCCGCGCGC CGATGCTGGC CCGCGCGATC
GGGCGCGGCC AGGCGATCGA GATAGCGAGC GGGGTCGACG GCGATCATGC GCGGGCGATG
GCGGCGGCGC CCGTGCCGCA CCCCTGGCTC GATGCGGAGG TGCCCGTCGT GCTCGGCATC
GGCCGGCTGC GCCCGCAGAA GAATTTCGAC CTGCTGATCG AGGCGGTCGG CATCGCCCGC
GCCGAACGGC GGCTGCGGCT CGTCATCCTC GGCGACGGCA CCGGGGAGGA ACGCAGCCGG
CTCGAACAGC TCGCCGCGCG CGCCGGGCTG GGCGAGGATT TCCTGCTCGC CGGCGAAAGC
AGCAACGTCT TCGCCTGGGC GGCGCGCGCG GGCGCGTTCG TGCTGCCGTC GCGCTGGGAA
GGCTCGTCGG TCGCGCTGCT CGAGGCGATG GCGGTCGGCG TCCCGGTGAT CGCCTCGCGC
CTCGCCGGCG ACGCCGCGCA GGTGCTCGAC GAGGGCCGCC ATGGCCTGCT CGTCGGCGGC
GAGGACCGCA CCGAGCTGGC GCGCGCGATC CTCGTCCAGC TCTCGGGCTA TGCGGTGCGG
CCGGGCGACC GCGCGCGCGC CTATGGCCTG CCGGGCGCCG CCTATCTCGA CCTGGTCGAG
GCGGTGATGG CCGAAATGGA CGGCACGGCG CGGGCCGCCG CATGA
 
Protein sequence
MGTIIIYVHD LRSSGVVRDA MMLADHIAGR HDAILVAGHG EGFFREEAER GRYRLVILKD 
RPSPAASRIT AAQPLRRWLR HQPPAVLLSM GNHGHATAYL ACRGLGHVRR IYRISNEVTR
GDGLRGALRM HWMERLIADA ARIAIVGAAL RRAPMLARAI GRGQAIEIAS GVDGDHARAM
AAAPVPHPWL DAEVPVVLGI GRLRPQKNFD LLIEAVGIAR AERRLRLVIL GDGTGEERSR
LEQLAARAGL GEDFLLAGES SNVFAWAARA GAFVLPSRWE GSSVALLEAM AVGVPVIASR
LAGDAAQVLD EGRHGLLVGG EDRTELARAI LVQLSGYAVR PGDRARAYGL PGAAYLDLVE
AVMAEMDGTA RAAA