| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2460 |
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| Symbol | |
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| ID | 5198161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2731027 |
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| End bp | 2732808 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640582008 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001262957 |
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| Protein GI | 148555375 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0793889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCAAAC CGGCGGGGCT GACAAAGCGC AAGGGCAGCA GCCAATACTA CTTCCGGATG
CGCTGTCCGA AGCATTTGGC TGGCCCGGGC GTTCGCAACG AAGTTTTGAT CAGCCTTAAG
ACTGCCGATC GGCGGCAAGC CCTCATGCGG TTGCCGGATG CGCGGGAGAA GGCGCATCGC
CTTTTTGTCA ATCCGCCGAC CAAATTGGAG ATCGTCGCCG CTCAGCCATA TCGCCGGTGG
CCCGATGATC CTCTTTGGCC TCTCCTTGAC ACTGCCGACG TCCTCGGAAT GGTCCAACGG
TATTTTCAGC TTGGCCTCAT CGAATTGGAT GCCGAAGAGC ACCTGACAGG CGCCTTGGCC
CCGGAAGCGT TGCAACGGGT TGCACAAGAT TTGGATGAGC AAATTGCCGC GCTGAGGGCC
GCACCGGATA CGGAGGAAGA AGAGGACCCG GTCGTAGGGG TGGCCATCGG CCTTCTTCAC
GAAGCGGGCG TGAGAACGCC CTATGCCAGT CAACCGGCGA GGCTGTTGCG AGAATATTTG
CGCAGAGCGA TGGAACAGCT TTTGACTATC GAACGGGCCC GATTGCATGG CGATTTTTCG
GTAACGTCCA CCGATCCGCT GTTTTCGATC CAGCCGATTT CCGCGTCAGT TCATCTCCCT
CAGATGCGGC ACGGGCCATC ATCGCCAAGG CTGGTACGGA TTGCGATCAA AGAGGCCGCC
GACCGCTACC TCAAGGAAGT GTTCCAAGCC GATCGCAAAA ACAAGACCGA GGAACGCTAT
CGCGCCGAGA TCAAGCATAT CGTCAGCTAC TTCGGCGAGC AGACCGTTTT GGCGGATTTG
AAGCGGGCTG ACAGTATCGA GTTCAGAGAT ATCTTCGCCA AACTGCCTCC GAATTTCTCG
AAGCGGCTCG ATGATAAGGT CTCCATCCGT GATCTGGCGG CCAGGAGAAA GCCGGATGAT
CCGGTGCTGG CTTGGGAAAC GCTGGATAAG TACCTCTCAG CGCTCAATCG CTTTATGCGC
TGGGCCTACA AGGAAGAGTA TACCGAGCGC GCGTGGGACG ATCTCAAACC GCTAAGCAGC
AAGCCGGACG GCTCGATGGC AAAGTTTCCT TTCGAGAACG ACGAGCTGCG CCGCATCTTC
AATCGGCCGA TCTACACCGG TTGCAAGGAC GACAGGAACG GCTTTGCCAA ACCCGGACCG
AACATCGTTC GCCGGAGCCG CTACTGGGCA CCATTGATCG CCCTGTTCAT GGGGCTGCGA
GCGGGCGAAA TCCTACAACT CACCCCAGCG CACTTCCGCA CTTCGGACGC GGGAACCCCT
TTCATCGTAT TGACGCTCGA CATGCGGCTC AAAAACGAAA ATGCCCAGCG CGAGATACCC
GTACATCCAA TGCTGGTTCG CATAGGGCTG CTGGATTGGG TGGCACGGCG CAGAGAGCAA
CCTGATGACA AGCTCTTCCC GGAAGTTGGA CTGGACGTAT TTCAGGCCGA AAGCCCCACA
TTCTCGAAAC GCTTCCGGAG CGACTTGAAG TATTTCGAGC TGGGGGAGCG TCGGGACAAG
CTCTCCTTCC ACAGCTTCCG TCACACCTTC AAGCGCGCCC TCGATCGCGC GGCGGTCCCA
GAGCAGGAAA AAGACGAACT ATGCGGCTGG GCGAGAGGGA AGAAGATCGG GCGCCGTTAT
GGCAGTGGGC TGGAGGCCGA TGTGCTCAAA CCCCACCTTG AGAAGGTGGT CTATGATCTC
GATCTCACCC ACCTCCTAAG CCATTCGCGA TTGTGTGACT GA
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| Protein sequence | MGKPAGLTKR KGSSQYYFRM RCPKHLAGPG VRNEVLISLK TADRRQALMR LPDAREKAHR
LFVNPPTKLE IVAAQPYRRW PDDPLWPLLD TADVLGMVQR YFQLGLIELD AEEHLTGALA
PEALQRVAQD LDEQIAALRA APDTEEEEDP VVGVAIGLLH EAGVRTPYAS QPARLLREYL
RRAMEQLLTI ERARLHGDFS VTSTDPLFSI QPISASVHLP QMRHGPSSPR LVRIAIKEAA
DRYLKEVFQA DRKNKTEERY RAEIKHIVSY FGEQTVLADL KRADSIEFRD IFAKLPPNFS
KRLDDKVSIR DLAARRKPDD PVLAWETLDK YLSALNRFMR WAYKEEYTER AWDDLKPLSS
KPDGSMAKFP FENDELRRIF NRPIYTGCKD DRNGFAKPGP NIVRRSRYWA PLIALFMGLR
AGEILQLTPA HFRTSDAGTP FIVLTLDMRL KNENAQREIP VHPMLVRIGL LDWVARRREQ
PDDKLFPEVG LDVFQAESPT FSKRFRSDLK YFELGERRDK LSFHSFRHTF KRALDRAAVP
EQEKDELCGW ARGKKIGRRY GSGLEADVLK PHLEKVVYDL DLTHLLSHSR LCD
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