| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2420 |
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| Symbol | |
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| ID | 5197445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2691265 |
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| End bp | 2693598 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581966 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262917 |
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| Protein GI | 148555335 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.180435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.160196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCC CGCGCGGGCG GAGCGGACAT CCGACAGGTT CAGTGGAGAC CAGAAGAATG
AAGACTCTCA AGCTTGTCAT CTCGGTGTCG ACCGCGGCCG TCGCGCTCGC GGCGTCGATG
CCGGCCATGG CGCAGGACGC CCAGGGCGCC GAGGACGGCG CCTCCGCGGG CGAGATCATC
GTCACCGCGC AGAAGCGCGC CGAGCGTCTG ATCGACGTGC CGGTCGCGAT CAGCGCGATC
TCGGCCGACG CGCTGACCAC CCAGAACATC AACCGCCTGT CGGAATATTT CGACCGGGTC
CCCGGCCTGC AATATTCGAA CCAGCGCGTC TCGGGCCTGG CGCTGCGCGG CGTCACCACC
GGCGGCGCGA CCTCGCCGAC GGTCGCGCTG CTCGTCGACG ACGTCCAGTT CGGCGGCACC
ACCGGCACCG GCCAGCCGCC GCTGCCCGAT TTCGACGCCA GCGCGGTCAG CCGGGTCGAG
GTGCTGCGCG GCCCGCAGGG CACGCTCTAC GGCGCGTCGA GCCTCGGCGG CCTGATCAAG
TACGTCCTCA AGGAACCGGA CACCAAGGAA TTCTCGGGCC GCATCGAGCT GGGCGGCACC
GCCGTCTCGC ACGGCGACAC CGGCTATGCG GTGCGCGGCT CGGTCAACAT CCCGATCAAC
GACTGGCTGG CGGTGCTGGG CAGCGGCTTC AAGCGCGAGG ACGCGGCCTA TCTCAACAAC
GCCAACCCGG CCGCGCTGAA GGCGAAGGAC GTCAACAGCC GCGACGTCTG GGGCTTCCGC
GGCGCGGCAC TGATCAAGCC GGCCGACAAT TTCCGCGTCG TCCTCTCGGC GCTGCGCCAG
AAGACCGACG CGATGAACAG CGACCTGGCG ATCACCGCCG GCGGCGTTCC GGTCTGCGCG
GCCTGCTATG CCGACACCTC GCCGCTACCC AACACCGCCG TCACCACCTT CGAGCCGGTC
TATGGCGACC TGACGATCAA CTCGCTCGAT TCGATCAACA AGGCGAAGTT CCAGCTCTAT
TCGGCGCGCG CCGAGCTCGA GCTGGGCGGG GTCACCATCA CCTCGATCAG CGCCTGGAGC
CGCGCCGACA ACGTCATCAC CAGCGACGTG TCCAAGGTGT TCGGCGGCCT GCTGAAGGCG
GTCTACGGCC TGCCGACGGC GCCGACCGTG CAGATCGCCA ATGCCGACCG CACCCATAAA
TTCTCGCAGG AACTGCGCCT CGGCGGCGAC ATCGGCACCA GCTTCACCTG GCTGGCCGGC
GGCTTCTACA CCGTCGAGCA TGCCGCGACC GACCAGACGC TGATCGCCTC GGGCAGCCTG
ACCGCGACGC CCTATATCGG CACCGGCCCC GGCAGCTATC GCGAATATGC CGGCTTCGCC
GACCTCACCT GGCACGCGAC CGACAAGCTC GATATCCAGG TCGGCGGCCG CTACGCGCAC
AACAAGCAGC ACAACGAGTC GACCCTGAAC ACCTCGCCGC AGACCGCGCC GGTGTTCGGT
TCGGGCACCA CCATCGCCGA TTCGAGCGAC AGCGCCTTCA CCTGGCTGAT CTCGCCGAGC
TATCATTTCT CGCGCGACAT CATCGCCTAT GCCCGCGTCG CCACCGGCTA TCGCCCGGGC
GGCCCGAACA TCGCCGCCCC GCCGTCGGTG GCGAAGTCGT ACAGCTCGGA CAAGGTGATC
AACTATGAGC TGGGCTTCAA GGGCAAGGTC GTTCCCGGCC TGCTGACGCT CGACGCCTCG
CTGTTCCAGA TCGACTGGAA GGACATCCAG CTCCAGGGCA CCGATTCGAT CAGCTCGCTG
ACCTTCCTGA CCAACGGCGG CAAGGCGCGC AGCCGCGGCC TCGAATTCGC CGCCAGCCTG
ACGCCGTGGC AGGGCATGAG CATCGACGCC AGCCTGACCT TCACCGACGC GACGCTGACC
GAGGATCTCC CGACCATCGT CAACGCGACC GGCCTTGCGG GCCTGAACGG CGATCGCCTG
CCCTTCTCGG CCAAGGTGGC AGCCAATGTC ACGGCGCAGC AGGTCTTCCC GCTGACCGAC
CGGCTGGAAG GCAATGTCGG CCTCACCGTC GTCTATGTCG GCGACCGCGC GGGCACCTTC
GTCACCGATG CCGCGAACGC GACCCGTCCG CGCATGCTGC TGCCCGAATA TACCACGGTC
GACATCCGCG GCGGCCTGAC CTTCGACGAG GTGTGGAGCG CGAACCTCTA TGTCCGCAAC
CTGTTCGACA AGCGCGGCGT CGCCGCCGCC GACAACCGCA ACGGCGTCAA CGTGCCGACC
GCGCTGTTCA TCCAGCCGCG CACCTTCGGC GTGACCCTGG CGCGGTCCTT CTGA
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| Protein sequence | MDRPRGRSGH PTGSVETRRM KTLKLVISVS TAAVALAASM PAMAQDAQGA EDGASAGEII
VTAQKRAERL IDVPVAISAI SADALTTQNI NRLSEYFDRV PGLQYSNQRV SGLALRGVTT
GGATSPTVAL LVDDVQFGGT TGTGQPPLPD FDASAVSRVE VLRGPQGTLY GASSLGGLIK
YVLKEPDTKE FSGRIELGGT AVSHGDTGYA VRGSVNIPIN DWLAVLGSGF KREDAAYLNN
ANPAALKAKD VNSRDVWGFR GAALIKPADN FRVVLSALRQ KTDAMNSDLA ITAGGVPVCA
ACYADTSPLP NTAVTTFEPV YGDLTINSLD SINKAKFQLY SARAELELGG VTITSISAWS
RADNVITSDV SKVFGGLLKA VYGLPTAPTV QIANADRTHK FSQELRLGGD IGTSFTWLAG
GFYTVEHAAT DQTLIASGSL TATPYIGTGP GSYREYAGFA DLTWHATDKL DIQVGGRYAH
NKQHNESTLN TSPQTAPVFG SGTTIADSSD SAFTWLISPS YHFSRDIIAY ARVATGYRPG
GPNIAAPPSV AKSYSSDKVI NYELGFKGKV VPGLLTLDAS LFQIDWKDIQ LQGTDSISSL
TFLTNGGKAR SRGLEFAASL TPWQGMSIDA SLTFTDATLT EDLPTIVNAT GLAGLNGDRL
PFSAKVAANV TAQQVFPLTD RLEGNVGLTV VYVGDRAGTF VTDAANATRP RMLLPEYTTV
DIRGGLTFDE VWSANLYVRN LFDKRGVAAA DNRNGVNVPT ALFIQPRTFG VTLARSF
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