Gene Swit_2370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2370 
Symbol 
ID5197909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2632690 
End bp2633550 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content67% 
IMG OID640581916 
Producthypothetical protein 
Protein accessionYP_001262867 
Protein GI148555285 
COG category 
COG ID 
TIGRFAM ID[TIGR02925] peptidyl-prolyl cis-trans isomerase, EpsD family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTAA AAGCTGCACT TTTGGGCGGC GCGATGGCCG CGGCCCTGCT GGTTTCCGGC 
TGCCACAAGG AGCCGAAGGG CCAGATATTG GCCATCGTCA ACGGCGAGGA AATCTCGCTG
CAGGAGCTCA ATGCCGAGCT GCAGGGCACG CGCATCCCGG ATTCGGTCGA CCGCGACAAG
CTGCGCAAGC AGGTGCTGCA GCGGCTGATC GACCGCAAGC TGATCGTCCA GAAGGCGCGC
GAGCAGGGTC TCGACAAGAC CCCCGAATAT GTCACCCAGC AGCGCCGGCT CGAGGAGAAT
CTCCTCGTCA CGATGCTGGG CCAGAAGATC GCGTCGACGG TGCCGATGCC CGACGATCGC
GACATCACCC AATATATCGC CGACAACCCG ACCCAGTTCG CGAGCCGCCA GCGGCTGTTG
CTCGACCAGA TCCAGTTCGC GGCGCCGAAG GACCCCAAGC AGCTCCTGAC GCTGCGTGAC
GCGCACACGC TGGAGGCGCT GGCGACCGGC ATCCAGAAGC TCGGCCTCGG CATGTCGCGC
GGCAAGGGCG TGATCGATAC CGGCCGGCTC GATCCGGCGC TGGTCAAGGT GATCAACCAG
CTTCCGCCGG GCGAGCCCTT CGTGCTGCCG TCGAACGGCC AATATGTCGC GAGCGTCATC
GTCGGCCGCG ACGCGACCCC GACGCCGACG CCGATCGCGC GCCAGGCCGC CGCCGAGATG
GTCCGCCGCA AGGAGCTGGT CGCCGAGAGC AAGGCGCAGG TCGCCCGCGC CCGTACGAGC
GCCGAGATCC AGTATCAGCC CGGCTACGAA CCGGACAAGT CGGCGATCAA GGCCTCGCAG
GCGAAGAAGG CTGCTAAATA G
 
Protein sequence
MKVKAALLGG AMAAALLVSG CHKEPKGQIL AIVNGEEISL QELNAELQGT RIPDSVDRDK 
LRKQVLQRLI DRKLIVQKAR EQGLDKTPEY VTQQRRLEEN LLVTMLGQKI ASTVPMPDDR
DITQYIADNP TQFASRQRLL LDQIQFAAPK DPKQLLTLRD AHTLEALATG IQKLGLGMSR
GKGVIDTGRL DPALVKVINQ LPPGEPFVLP SNGQYVASVI VGRDATPTPT PIARQAAAEM
VRRKELVAES KAQVARARTS AEIQYQPGYE PDKSAIKASQ AKKAAK