Gene Swit_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2020 
Symbol 
ID5199436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2261244 
End bp2262581 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content67% 
IMG OID640581564 
Productcytochrome P450 
Protein accessionYP_001262517 
Protein GI148554935 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.344903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCA AAGCCCAATC AGGATGCCCC GTGGCCGGCA TCGACATCAA GGAGCTGATG 
TCGCGCGAGT TCGCGGCCTG CCCCTATCCC AAGCTGGCCG AGCTCCAGGG CGAGGCGCCG
GTCCACCAGG TCGGCGACAA GCCCTGGTAT CTGGTGACGC GGCACGACGA ATGCCTGCGC
GTGCTGATGG ACCCGGAGCA TTTCTCCAGC GAGCATGACG ATTTCGGCCC CGCCTTGAAG
GCGATCGGCA TCACCCCGAC CCCGGACCAG GTCGAGCGGA TGCAGGCGCT CGGCGGCAAT
CGCAGCAACA TGGTCGACGT CATTCCCCAC CGCGACCCGC CCGTCCACAC CCGCCAGCGC
AAGGTGATCA TCAAGGCGGT GACGGCCCGC TTCCGCCGCT GGGAGGAGTT CATCGAGGAA
CAGTCGGCCA GGCTGCTCGC CCGCTTCGAG GGCCGCACCG AGATCGACCT GATCGCCGAG
GCCGCCGCTC CGCTGCCGAT CGCGGTGATC GCCGACATTC TCGGCATCCC CGACGACTAT
CTGCCGAAGA TCAAGCAATG GTCGGACGAT TCCAGCCAGA CGTCGGGCCG CTACGCCAGC
GACGAGGACT GGATGGCGCT GGCCAAGGCG ATGTCCGAGC AGCGCGCCAT GTTCGCCTCG
GAAGTCCGCA AGCGGCTCGC GGATCCCTCG GACGACCTGA TCGGCCGCAT CGCCGCGATG
ACGCAGGAGC CCGTGGACGA GGCGACGGGC GAAGGCCCGC TCGATTTCGA TGAGGGCGTC
GAGCTGCTTA CCCTCGCGAT GCTGGGCGGC AACGAGACCA CCACGCAGCT CATCGGCGCG
GCGATGTTCT ATCTCGCGAC CGAGCCCGGC CTGCTCGACC GGGTCCGCAC CCAGCCGGAC
ATCATCCCCG GCATAGTCGA GGAATCGCTT CGCCTGACCG CGCCGGTCTT CACGATGATG
CGCTTCTGCA AGCAGGATGC GGAGATCGGC GGCGTGCCGA TCCCGGCCGG CTCGATCGTC
TCGGTCTGCT TCAACCAGGC GAACCGCGAT CCCAAGGTCT TCCCCGATCC CGACACGTTC
GTCGCCGAGC GGACCAACAC CCGCCGGCAC CTGTCGTTCG GGCAGGGCAT CCACGTCTGC
CCCGGCGCGC AGCTCGCCCG CCTCGAGACC AGGATCTGGA TCGCCCGCCT CGCCGAGCGG
GTGAAGCATA TGGAACTCGC CGGCCCCGAT GCCGTCCGCT ACGATCTGGC AAGCCTCGCC
GTGCGCGGCA TGACCAGCCT GCGCGTGCGC TACGAGCTCT TCGACAAGCA ATCGGGACAA
TTGGGAGAAG CCGCATGA
 
Protein sequence
MDSKAQSGCP VAGIDIKELM SREFAACPYP KLAELQGEAP VHQVGDKPWY LVTRHDECLR 
VLMDPEHFSS EHDDFGPALK AIGITPTPDQ VERMQALGGN RSNMVDVIPH RDPPVHTRQR
KVIIKAVTAR FRRWEEFIEE QSARLLARFE GRTEIDLIAE AAAPLPIAVI ADILGIPDDY
LPKIKQWSDD SSQTSGRYAS DEDWMALAKA MSEQRAMFAS EVRKRLADPS DDLIGRIAAM
TQEPVDEATG EGPLDFDEGV ELLTLAMLGG NETTTQLIGA AMFYLATEPG LLDRVRTQPD
IIPGIVEESL RLTAPVFTMM RFCKQDAEIG GVPIPAGSIV SVCFNQANRD PKVFPDPDTF
VAERTNTRRH LSFGQGIHVC PGAQLARLET RIWIARLAER VKHMELAGPD AVRYDLASLA
VRGMTSLRVR YELFDKQSGQ LGEAA