Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2002 |
Symbol | |
ID | 5198750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2242523 |
End bp | 2243545 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640581547 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001262500 |
Protein GI | 148554918 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.200285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGG TCCTCTACGA ATATTCCGGG CCGCTGTTCG ACAGCGAACA GTCCGCCCGG TTCGTGGCAT CGGTGGGACG CGATTATTAC GCCGCCGACT GTCTCGTCAG GCCCGAGCAG GAGGATTTCC TCCTGCGCAA CACGCGAAGC TGGGCCGGCC AGCTTCCAAT CTCCGAGCAT AGCTGCGTGG GCGCCCGGAC GGTCGTGCAA CGATCGTCCC GCCAGGTGCG CGACAGCAGC GCCGACATCT ACCTGCTCTG GATCCCCGTG CGGGGTTCGG TCACCATCTC GCAGGGCGGG CGTTCGGCGG TGATAGGGCG CGGCAATCTC GCTTTATCCT CGTCGCGCGA ACCACTGTGC ATCCTGACCG AGCCCGACGA CCGGCAGGAG CATCTGTCCT ACCAGGTTTC CCTCCCCGCC AGGATCATCG AGGAAGCCCT TCCCGACCCG CGACGGCTTT GCGCGGTCGG CTATTCATCG CAGCTCGGCG GCGCCCGGAT CGCCCGCGAG CTGTTCCTGT CGCTCCACAA TGAAGGCGAC CGGATCGACG GTCCGTCCTC GGCCGCGCTG GCGCAGTCGG CGCTGGAGGC CCTGTTCCGG ACCCTCGCGC CCGATCGCTG CGACGCGGCG CAGCCGGCCG GCGCGCGCGC GATGAAGCTG CAGCGCCTGC TGGACTATAT CGCGCTCAAC CACTCGGACC CCGAGCTCAC CACCGAGAAG GCGGCGGCGG CCTGCGAGAT CTCGACACGC TATCTCCACT ATCTGCTCAA GGCGCGGGGC CTGCGCTTCC ATGACCATCT GTGGGACGCG CGGCTGGACA GCGCCCATCG CCAGCTCGCC GATCCGGCCC TGGCCCGCCG GACGATCGCC GAGATCGCCT ATACCGCGGG CTTCAAGAGC ACGGCCCATT TCAGCCGCTC CTTCCGCCGC CGCTTCCAGC AATCCCCGCG CGACGTGCGG AACCGGGCCG GGCAGGAAGG CGATCCCATG GTCAGCTCGG AAACAGGCCT CCATCGACAT TGA
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Protein sequence | MTQVLYEYSG PLFDSEQSAR FVASVGRDYY AADCLVRPEQ EDFLLRNTRS WAGQLPISEH SCVGARTVVQ RSSRQVRDSS ADIYLLWIPV RGSVTISQGG RSAVIGRGNL ALSSSREPLC ILTEPDDRQE HLSYQVSLPA RIIEEALPDP RRLCAVGYSS QLGGARIARE LFLSLHNEGD RIDGPSSAAL AQSALEALFR TLAPDRCDAA QPAGARAMKL QRLLDYIALN HSDPELTTEK AAAACEISTR YLHYLLKARG LRFHDHLWDA RLDSAHRQLA DPALARRTIA EIAYTAGFKS TAHFSRSFRR RFQQSPRDVR NRAGQEGDPM VSSETGLHRH
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