| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1896 |
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| Symbol | |
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| ID | 5198253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2123877 |
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| End bp | 2124902 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640581441 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001262394 |
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| Protein GI | 148554812 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTT CGCGCCGTGA AGCCGCCCAA CTGCTGTTCG CCGCGCCGGT CGCGGCGCTC
GCGCTCAAGC CCGGGCTCGC CTCCGCGCTG ACGCCGGCCC GGCCCAATTC GAAATGGGCG
GGCGTGCAGG TCGGCCTCAA CGTCCCCTAC AGCTTCGGCA CCCGCACCGC GCTCAGCGCC
GAACAGGTGC TCCAGCGTAC CGTCGCGTTG GGGATCAGCG CGGTCGAGCT GCGCATCCAG
CCGATCGAGA TCTCGCTGGG CCTGCCCCAC GACCTCGTCC TCGGCCCGGC CCCGTCGGAC
TATCGGGCGG TCTATTATCC CAAGGGCGAC TCCCCCGAGA TCCTGCCGCC CGCGCCGGGG
CGGACGACGA TCACCCAGGA CTATGTCGAC GCCTACAAGA TCGGCGCGGC CAGGCGCCGC
GACTGGCGCC TCGCGCTGCC GATCCGATCG GTCGAGAAGA TCCGTCGCAT GTATGACGCC
GCCGGGGTCA GGATCGAGAT CGTCAAGTTC GACGGCATCA ACGACTTCGA GGGCGAGGAA
CTCGACTATA TGTTCAACCT CGCCAAGGCG ATCGGCGCGC GCGCCGTGTC GGGCGAGATG
GCGATCCCGG CGATCCCCAA GCTCGCGGCG GCGGCGGACA AGCACCGCTT CATGGTCGGC
CTGCACAACC ATCTGGCGAT CACCCCGGCC ATGTGGGAGG ACGCCTTCCG CCAGAGCCGC
TACCTCGGCG CCAATGTCGA CATCGGCCAT TTCCTGGCCG GCAACCAGGC GTCGCCGCTG
CCCTTCATCG AGCAGCATCA CGACCGGATC ACCCATCTCC ACGTCAAGGA CAAGACGCTG
GGCAACGTCA ATGTCGAGTT CGGCAAGGGC GACACCCCGG TCCGCGAGAT CCTCCAGACG
ATCCGTGACA ACAAGTGGAA CATCCAGGCG ACGATCGAAT ATGAGATCCC GCTCGACCCC
ACCGCCGATC GCGACGCCGA AATCCGCAAG GCGATCGCCT ATTGCCGCCA GTGCCTGCTC
AGCTAG
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| Protein sequence | MSFSRREAAQ LLFAAPVAAL ALKPGLASAL TPARPNSKWA GVQVGLNVPY SFGTRTALSA
EQVLQRTVAL GISAVELRIQ PIEISLGLPH DLVLGPAPSD YRAVYYPKGD SPEILPPAPG
RTTITQDYVD AYKIGAARRR DWRLALPIRS VEKIRRMYDA AGVRIEIVKF DGINDFEGEE
LDYMFNLAKA IGARAVSGEM AIPAIPKLAA AADKHRFMVG LHNHLAITPA MWEDAFRQSR
YLGANVDIGH FLAGNQASPL PFIEQHHDRI THLHVKDKTL GNVNVEFGKG DTPVREILQT
IRDNKWNIQA TIEYEIPLDP TADRDAEIRK AIAYCRQCLL S
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