4 homologs were found in PanDaTox collection
for query gene Swit_1515 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_1515  hypothetical protein  100 
 
 
121 aa  248  2e-65  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1650  type IV pilus assembly PilZ  38.54 
 
 
113 aa  58.2  0.00000004  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3112  type IV pilus assembly PilZ  36.78 
 
 
147 aa  50.1  0.000009  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.599577 
 
 
-
 
NC_007794  Saro_2101  hypothetical protein  36.05 
 
 
112 aa  45.1  0.0004  Novosphingobium aromaticivorans DSM 12444  Bacteria  hitchhiker  0.00724598  n/a   
 
 
-
 
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