Gene Sala_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1650 
Symbol 
ID4080958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1732562 
End bp1732903 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content64% 
IMG OID638010023 
Producttype IV pilus assembly PilZ 
Protein accessionYP_616696 
Protein GI103487135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGA TTGACACGAG CAAGGCCCAT TATGTCGGCC TCGACCAGCG GATCGCTCCG 
CGGAGCGACG TCTATTGCCG CCTGCCCTTC GTCATGCCCG ACGGGCGGCA GGAAATGTGC
ACCTGCGTCA ACATCAGCGC CGACGGCCTG TTGATGCGCT TCGAGCGCGG GCTGGAGCCC
GGCGATCTCA TCGTGTTCCG CATGCCCATC ATCGGCCGTG CCGCGGCAAA AGTGGTCTGG
TCGCTGGGCG GCAAGACCGG GGTGCAGTTC GAAAAATCGA TCTCGGTCGA GGATTATCTG
CCGATGATCC GCGCGATGGG CGCACGCGGG GACGTGAACT GA
 
Protein sequence
MRKIDTSKAH YVGLDQRIAP RSDVYCRLPF VMPDGRQEMC TCVNISADGL LMRFERGLEP 
GDLIVFRMPI IGRAAAKVVW SLGGKTGVQF EKSISVEDYL PMIRAMGARG DVN