Gene Swit_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1288 
Symbol 
ID5198043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1441175 
End bp1442209 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content69% 
IMG OID640580835 
Productflagellar motor switch protein FliG 
Protein accessionYP_001261791 
Protein GI148554209 
COG category[N] Cell motility 
COG ID[COG1536] Flagellar motor switch protein 
TIGRFAM ID[TIGR00207] flagellar motor switch protein FliG 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.392476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG GAACCCCGAT CGATACCGAG AACGCGACGC CGGTCGAGCC TTCGGGCAGC 
TCCGCCGCCG CAATCCTGCT GATGCTGCTC GGCGAGGAGG AGGCCGCCAC CGTGCTGAGC
CGCCTCCAGC CCGACGAGGT CCAGCATCTC GGCGGCGCGA TGTTCAACGT CGCCAACATC
TCCGAGCAGG AGATCGACGG CGTGTTCGAC GTGTTCGTCG ACCGCGCCCG CGTCCGCACC
ACGCTGGGCT TCGGCGTCGA GCGCCAGATC AAGGGCATCA TGCACAAGGC GCTGGGCCAG
GACAAAGCCG ACCAGGTCCT GCAGCGCATC ACCCCGGCCC AGCACACCAA CGCGCTGGAA
AACCTGAAAT GGATGGACGC GCGGCAGATC GCCAACCTGA TCGAGTTCGA GCATCCCCAG
ATCGCGGCGA TCGTCCTCGC CTTCCTCGAC GCGCAGCGCG CCGCCGACGT GCTCGCGCTG
CTGCCCGAGG AGATGCAGGC CGACCTCGTC TACCGCGTCG CGACGATGGG ACCGGTGACC
GAGACCGCGC TGGCCGAGCT CGACGAGCTG CTGAGCCGCC CCGCCACCGC CCAGTCGACC
GGCGCCACCA CCCGCCGCGG CGGCGCGGGC GAGGCCGCGA AGATCGTCAA CAGCTCGCGC
AAGGCCGCCG AGCAGCGGAT CATCAAGGCG CTCCAGAAGC TCGACAAGAC CGTCGCCCGC
ACGATCGAGG AGGAGATGTT CGTCTTCGAC AACCTGATGG CGCTGACCGA GAAGGACCTC
GGCACGCTGT TGCGGGCCGT CGACAACGAC ATCCTCGTCG TCTCGCTCAA GGGCGCGGAC
GAGAAGCTGC GCAGCAAGAT CTTCGGCTGC ATGTCGAGCC GCGCCGCCCA GTCGATCCAG
GACGAGATCG CCGATCGCGG GCCGATGCGC CTGGCCGACG TCCAGGAAGG ACAGAAGCAG
ATGCTCGCCG TCGCCCGCAA GCTGGCGGCC GAGGGCACGA TCAGCCTCGG CGGCAAGGGC
GACGACTTTG TCTGA
 
Protein sequence
MADGTPIDTE NATPVEPSGS SAAAILLMLL GEEEAATVLS RLQPDEVQHL GGAMFNVANI 
SEQEIDGVFD VFVDRARVRT TLGFGVERQI KGIMHKALGQ DKADQVLQRI TPAQHTNALE
NLKWMDARQI ANLIEFEHPQ IAAIVLAFLD AQRAADVLAL LPEEMQADLV YRVATMGPVT
ETALAELDEL LSRPATAQST GATTRRGGAG EAAKIVNSSR KAAEQRIIKA LQKLDKTVAR
TIEEEMFVFD NLMALTEKDL GTLLRAVDND ILVVSLKGAD EKLRSKIFGC MSSRAAQSIQ
DEIADRGPMR LADVQEGQKQ MLAVARKLAA EGTISLGGKG DDFV