Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1074 |
Symbol | |
ID | 5196799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1199309 |
End bp | 1200379 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640580619 |
Product | L-threonine aldolase |
Protein accession | YP_001261578 |
Protein GI | 148553996 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0718237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCGAGG ACGATCAGGC CGAGCGGCTG AACTGCTCCC ATATCTTGCC AGGGCACCGG CCGGTGGACG TGCGCGAACT GCTCGCCACG CTGGCGGCGC ATCCAATGGC GGCGCGCTCG CCCGATTTCT ATGGGATGGG TGGTGCCGTT GCCGAACTGG AGGCGCAGGT TGCGGCATTG CTCGGCAAGG AACGCGGGTT GTTCTTCGTC AACGGCATGA CCGCGCAGAT GACCGTTCTG CGGCGCCATG CGGACCTGGC GGGAACCCCC AATGTCGTCA TCCATCCGCT GAGCCACATG GACGTCGACG AAGCCAATGG GCTCGAGCGC GCGGCCGGTC TGACACCGGT ACGGTTGGGG CGACACGCGC CTTTCGCGCT CGATGCGCTC GAGCAGGTGA GCGATCCGCT AGCGGCGGTG GTTCTCGAAC TCCCGCTCCG TCGTGCGGGC TATCTGCTGC CACCGATCGA GGAGGTACGC GCGATCGCGG ATCATTGCCG CGCGCGCGGG ATAGCCCTCC ATATCGACGG TGCGCGGTTG TGGGAGGCGG CCGCCGGCTA CGGGGTCGAG CTCGCCGACC TCGCTGAACT CGGTGATAGC GTTTATGTCT CGCTCTATAA GGGGCTGGGA GGGCTTGGCG GCGCCGTCAT CGCCGGCTCG GCCGACTTCA TCCAATCGCT GGCGATTTGG AAGGGGCGGT TCGGCGGCAA CATGTTCACC GCCTTTCCTT ATGCTCTGGC CGGCCTTGCC GGGCTGGAGC GCCACCTGCC GCGCATGCCC GCCTATGTCG CCCGTGCGCG CGAGCTGGCG GCGCTTCTGG CACGAGACTT CCGGCTCAAT CCGGTCGTGC CGCACGTCAA TGCCTTCCAG CTACTGTTGC CGGGGACGCG CGAGGCGCTG GTGGCGCGTA ACCGCGCCTT CGCGCAGACA CGGGGTGTTT GGCTGTGGAA CACTTTGGTG GAGGCGCCGA TCGCCGGGCA AACGATCGCC GAGGTGGTGA TCGGCGAGAG TTCGGAGCGG TTCACGATGG AGGAGGCCGC CGCATGGATA TCGGCCTTTT CTAACCAATA A
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Protein sequence | MTEDDQAERL NCSHILPGHR PVDVRELLAT LAAHPMAARS PDFYGMGGAV AELEAQVAAL LGKERGLFFV NGMTAQMTVL RRHADLAGTP NVVIHPLSHM DVDEANGLER AAGLTPVRLG RHAPFALDAL EQVSDPLAAV VLELPLRRAG YLLPPIEEVR AIADHCRARG IALHIDGARL WEAAAGYGVE LADLAELGDS VYVSLYKGLG GLGGAVIAGS ADFIQSLAIW KGRFGGNMFT AFPYALAGLA GLERHLPRMP AYVARARELA ALLARDFRLN PVVPHVNAFQ LLLPGTREAL VARNRAFAQT RGVWLWNTLV EAPIAGQTIA EVVIGESSER FTMEEAAAWI SAFSNQ
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