| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0962 |
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| Symbol | |
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| ID | 5197806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1070673 |
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| End bp | 1071902 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580508 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001261467 |
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| Protein GI | 148553885 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.136632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAG AGGATCCGAC GCTGAGCCAT ATCGGCCGCT CGATCGCGGA GATCCGGGCC
GAACTGGGCG TCGATCCGGT GTCGGTGGAG GCGATCCGCG ACCCGGCGGT CTATGAGCTG
GAGCGCGAGA AGATCTTCCG CCGCGCCTGG CTGAAGGTCG CGACCGCCTG GGAGATACCG
GAGATCGGCG ACTACAAGGT CAAGGAGATG CCGGTCGCCG ACACCTCGGT GCTGATCGTG
CGCGGCAAGG ACGACAAGAT CCGCGCCTTC CACAATGTCT GCACCCATCG CGGCAACAAG
GTCGTTCCCA ACGGCGATTT CGAGAGCTTC GGCCGGTCCC GCGCCGGGGT GGTCACCTGC
CGTTTCCACG GCTGGGTGTT CGGCACCGAC GGCCCGCTGC GCTCGGTGCC GATGGAGGAG
GGCTTCGGCA AGATCGACAA GAGCTGCCTC GGCCTGCGCG AGATCGCCTG CGACACGTGG
GAAGGTTTCG TCTTCATCAA CTTCGCCGAC CCGCCCGAGC AGAGCCTGCT CGACTATCTG
GGCGACTTCG CCAAGCTGTT CGGCGGCTAT CCCTATGCCG AATCGACCAC CATCTTCCGC
TATTCGACGG TGCTCGAATG CAACTGGAAG GTCGCGCACC AGGCCTTTTC CGAGGGCTAT
CACGTGCCGA CCATCCATGC CGGCTCGCTG CCCGGCTTCC GCGGGGTCGA GCATAGCGAT
TTCAAGCTGA TGGGGCCGCA CGCCTCCTCG ACCATCTATG GCGCGGGGAT GGACACCGCG
GCGTCGACCG CCGCCTTCGC CGGGGTGCTG CACGGCGCCG AGCCGCACCG GCCGCGCCCC
GACCAGCTTC CGCCCGGGAT CAATCCGACC CGGCGCACCG ACTTCCAGTT CGAGCTGCCC
AACCTCTTCC CGAACCTGAT CATCCATCTT TCGGCGGGCT GCGGCTATCC GGGCATGTCC
TTCTTCACCC ATCAGTTCTG GCCGCTCGAC CATGGCCGGA CGCTGTGGGA GGGGATCAAC
TATTTCCGGC CGGCGCGGAA TGCCGCCGAG CGGGTGGCGC AGCTCCACGT CAACGCGCTC
CACCGCAACG CCTGGCTGGA GGACACCGCG ACGATGGAGG ACACCTTCAC CGGCATCCGA
TCCGGCGCGA TCGACCAGAT GTACCTGATG GACCAGGAAT TCCTGATCCG CCACGCCGTC
CGCGTCCACG ACGATTTCCT GGCCGCCTGA
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| Protein sequence | MNAEDPTLSH IGRSIAEIRA ELGVDPVSVE AIRDPAVYEL EREKIFRRAW LKVATAWEIP
EIGDYKVKEM PVADTSVLIV RGKDDKIRAF HNVCTHRGNK VVPNGDFESF GRSRAGVVTC
RFHGWVFGTD GPLRSVPMEE GFGKIDKSCL GLREIACDTW EGFVFINFAD PPEQSLLDYL
GDFAKLFGGY PYAESTTIFR YSTVLECNWK VAHQAFSEGY HVPTIHAGSL PGFRGVEHSD
FKLMGPHASS TIYGAGMDTA ASTAAFAGVL HGAEPHRPRP DQLPPGINPT RRTDFQFELP
NLFPNLIIHL SAGCGYPGMS FFTHQFWPLD HGRTLWEGIN YFRPARNAAE RVAQLHVNAL
HRNAWLEDTA TMEDTFTGIR SGAIDQMYLM DQEFLIRHAV RVHDDFLAA
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