Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0897 |
Symbol | |
ID | 5197086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 987443 |
End bp | 988270 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640580443 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001261402 |
Protein GI | 148553820 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.216969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.388897 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGTAA TTATGTCTTT GGAATCCCGA GGCGCCGTCA CCCGGCCCGG CAGCGCGATC GGTCGCGCCG GGCTGGTCAC CGCGGGGGGC GCCGGCATCG GCCGGGCAAT CGCCCTGGAA TGGGCGGCCG AGGGCGGCTC CCTGGTCGTC GGCGATCTCG ACCGGGAGGC GGCGATCGAG ACCGCGCGCC AGGTCGAGCA GATGGGCGGG CGGGCCATCG GCCTCGGGAT GGACGTGACC GATCCGGACG CCATGCCGGC GATGATCGAG GCGCTCGGGC AACTCGGCGA TCCCCTCCAC GCCCTGTTCA ACGTCGCCGG CGCCAGCCTG GCGAAGCGCG TCGACGAAAT GGTCGATGCC GACTGGGACG GCGTGCTCGA TCTCAACCTG AAATCGATCT ACCGCTGTTC CAAGCCGGTG ATAGAGGTCC TCCGCCGCAA CGGCGGCGGC GCCATCGTCA ACGTCGCTTC GACGGCGGGC ATCCTCGCCG AGAATCGATG CTCCGCCTAC ACCGCCGCGA AAGGCGGAGC GGTCATGCTG ACCCGGAACA TGGCGATCGA TTTCGCCCGC GACAGTATCC GGGTGAACGC CGTCTGCCCC GGCAGCACGA TGACGCCACG CATCCAGGGA TGGCTCGACC GCCACCCCGG GCACGAGGAT CTCATGGAAC GGATTTGCCC GATGAAGCGC TATGCGCGCC CCGAAGAGGT GGCCAAGCCC TCCATCTTCC TCGCCTCGGA CGCCGCATCC TACATAACCG GGGCCTCGCT GGTCATCGAC GGCGGCCTCA CCGCAGGCGT CCGCTTCTCC ATTTTCGAGG ATGCCTGA
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Protein sequence | MEVIMSLESR GAVTRPGSAI GRAGLVTAGG AGIGRAIALE WAAEGGSLVV GDLDREAAIE TARQVEQMGG RAIGLGMDVT DPDAMPAMIE ALGQLGDPLH ALFNVAGASL AKRVDEMVDA DWDGVLDLNL KSIYRCSKPV IEVLRRNGGG AIVNVASTAG ILAENRCSAY TAAKGGAVML TRNMAIDFAR DSIRVNAVCP GSTMTPRIQG WLDRHPGHED LMERICPMKR YARPEEVAKP SIFLASDAAS YITGASLVID GGLTAGVRFS IFEDA
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