Gene Swit_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0870 
Symbol 
ID5197169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp964046 
End bp964645 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content68% 
IMG OID640580415 
Producthypothetical protein 
Protein accessionYP_001261375 
Protein GI148553793 
COG category[S] Function unknown 
COG ID[COG4430] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.145449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.37965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCG ATCCCCGCAT CGACGCCTAT ATTGATCGAG CCGCGCCCTT TGCCCGGCCG 
GTTCTTGCCC ATCTCCGTGA TCTGGTTGGA AAAAGCTGCC CCGAAGCCGA GGAGACGATC
AAATGGGGCT TCCCCCATTT CGTGCTCGGC GGCGCCATTC TTTGCAGCAT GGCCGCCTTC
AAGGCGCATG TCGCCTTCGG CTTCTGGCAG AACCGGCGCG TGACCGGCGA GCAGGCGCCG
GAGAAGGACG CCATGGGCCA GTTCGGGCGG ATCGCCGCCA TCGCCGACCT GCCCGATCCC
GCCCTGCTCG GCGACATGAT CGCGCGGGCG GCCCGGCTGA TCGAAAGCGG CGAGAAGGCG
CCCCGCCCGC TCAAGCATGC CAGGCCGCCG GTCGAGCCGC CCGCCGACCT GATCGCCGCG
CTCGGCGCCT CGCCGCGCGC CGCCGCGACC TTCGAAGGCT TTCCACCGGG ACAGCGGCGC
GAATATGTCG AGTGGATCAC CGGGGCGAAG CGCGAGGAGA CGCGCCGGAA GCGACTCGAC
ACGACGATCG CCCAGCTCGA GGAGGGCAAG CGTCTCAACT GGAAATATGA ACGCGGCTGA
 
Protein sequence
MKSDPRIDAY IDRAAPFARP VLAHLRDLVG KSCPEAEETI KWGFPHFVLG GAILCSMAAF 
KAHVAFGFWQ NRRVTGEQAP EKDAMGQFGR IAAIADLPDP ALLGDMIARA ARLIESGEKA
PRPLKHARPP VEPPADLIAA LGASPRAAAT FEGFPPGQRR EYVEWITGAK REETRRKRLD
TTIAQLEEGK RLNWKYERG