Gene Swit_0830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0830 
Symbol 
ID5201021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp924256 
End bp924741 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content67% 
IMG OID640580374 
ProductMarR family transcriptional regulator 
Protein accessionYP_001261335 
Protein GI148553753 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.170998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGG CGCCGATCCG CGAGAAACAT GATGGCGCGC TGGCCGGCCA GATGGACGTG 
CGCGTCTGGC TGCGCCTGCT GAGTTGCGTC ACCGTCATCG AGAAGCGCCT GCGCCGCCGC
TTCGTCGCCC AATATGATAC GACGCTGCCG CGGTTCGACG TGATGGCGAC GCTCGAACGC
TTTCCCGACG GCGTGTCGAT GGGCGAGCTG TCGCGCGCGC TGTTGGTCTC CAACGGCAAC
GTCACCGCGC TGGTGAAGCA GCTCGAGTCG GACGGCTATG CGTCGAGCCG CCCCGCGCCG
GACGACCGGC GATCGTCGAT CGTGGCGCTG ACCGACCTGG GTCGCCGCCA TTTCGCCGAA
CTGGCGGCCG CGCATCGCAC CTGGATCCAG GGCATGTTCG CCGAGCTGTC GGACAACGAC
CATATCGAGC TCTACAAGCT GCTGGCGGTC CTGAAGCACT CGATCGGGGC CGACGACGAG
AAATAG
 
Protein sequence
MATAPIREKH DGALAGQMDV RVWLRLLSCV TVIEKRLRRR FVAQYDTTLP RFDVMATLER 
FPDGVSMGEL SRALLVSNGN VTALVKQLES DGYASSRPAP DDRRSSIVAL TDLGRRHFAE
LAAAHRTWIQ GMFAELSDND HIELYKLLAV LKHSIGADDE K