Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0830 |
Symbol | |
ID | 5201021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 924256 |
End bp | 924741 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640580374 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001261335 |
Protein GI | 148553753 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.170998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGACGG CGCCGATCCG CGAGAAACAT GATGGCGCGC TGGCCGGCCA GATGGACGTG CGCGTCTGGC TGCGCCTGCT GAGTTGCGTC ACCGTCATCG AGAAGCGCCT GCGCCGCCGC TTCGTCGCCC AATATGATAC GACGCTGCCG CGGTTCGACG TGATGGCGAC GCTCGAACGC TTTCCCGACG GCGTGTCGAT GGGCGAGCTG TCGCGCGCGC TGTTGGTCTC CAACGGCAAC GTCACCGCGC TGGTGAAGCA GCTCGAGTCG GACGGCTATG CGTCGAGCCG CCCCGCGCCG GACGACCGGC GATCGTCGAT CGTGGCGCTG ACCGACCTGG GTCGCCGCCA TTTCGCCGAA CTGGCGGCCG CGCATCGCAC CTGGATCCAG GGCATGTTCG CCGAGCTGTC GGACAACGAC CATATCGAGC TCTACAAGCT GCTGGCGGTC CTGAAGCACT CGATCGGGGC CGACGACGAG AAATAG
|
Protein sequence | MATAPIREKH DGALAGQMDV RVWLRLLSCV TVIEKRLRRR FVAQYDTTLP RFDVMATLER FPDGVSMGEL SRALLVSNGN VTALVKQLES DGYASSRPAP DDRRSSIVAL TDLGRRHFAE LAAAHRTWIQ GMFAELSDND HIELYKLLAV LKHSIGADDE K
|
| |