| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0683 |
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| Symbol | |
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| ID | 5196126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 746086 |
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| End bp | 747453 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580227 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001261188 |
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| Protein GI | 148553606 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.65026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.866851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGGAA CAACGCAGAG CGGCGCACGG CAGCGCGAGG CGGGCCTCGA ACGCGGCCTC
ACCCGGCGCC AGCTCACCAT GATCGGCATC GGCGGCGCGA TCGGCACCGG GCTGTTCATG
GGCAGCGGGC TGGCGATCGG CTATGCCGGG CCGGGCGTGC TGCTGAGCTA TCTGCTGGCG
GCGGTGATCT CGCTCGCGGT GATGTTCAGC CTCGCCGAGA TGGCGGTGCT CAACCCGACC
GCCGGATCGT TCGGCACCCA TGCCGAGCTC TACATCTCGC CCCTCGCCGG CTGGATCGCG
CGCTGGACCT ATTGGGCGGA GATGGTGATC CTGATCGGCA GCGAGGCGGT CGCGGTCGGC
CATTATCTCA GCTTCTGGCT GCCGGGATTG CCGGTGTGGC TGTCGATCCT GCTGTCCGGC
GGCGGCATCC TGTTCGTCAA CATGCGCGCG GTGGGCAGCT TCGGTACGGT CGAATATTGG
CTGTCGGCGA TCAAGGTGGC GGCGATCCTC GCCTTCATCC TGCTCGGCCT CGGCATGGTG
CTGGGCGTCG GCACCCCGGC GATCGGCCTG TCCAACTATA TGGTCGACGG CGGCCCGCTG
CCCTTCGGCA TGAAGGGCGT GTGGATGGGC GCGATGATCG CGATCTTCTC CTTCTTCGGG
ATCGAGATGA TCGCCGTCGC CGCCGGCGAG GCCGACGATC CCGGCAAGGC CGTGCCGCAC
GCGATGCGCA CCCTGCTCGT CCGGCTGTGC CTGTTCTACC TGCTGTCGAT CGCGATCATC
CTCGCCATCG TTCCCTGGTC GAGCAGCGGC GCGGCGGTCG TCGACCAGAG CCCCTTCGTC
AAGGTGTTCG CGGGCTTCGG GATCGTCGGC GCGGCGAGCG TCATGAACTT CGTCGTGCTG
TGCGCCGCGC TGTCGGCGAT GAACAGCAGC CTCTACATGG CCAGCCGCAT GCTGTTCTCG
CTCGCCCGCG CCGGCGATGC GCCCGCATCG TTCGGCGTGC TGAACGGGGC GGCGGTGCCC
GCCCGCGCCG CGCTCGTCTC CGGGCTCGGC ATCCTCATCG CCGCCGCCGT CGCGCTGCTC
AGCCCGCGCG CCTTCGAATA TATGCTCGGC ATCGCGCTGT TCGGCGGGCT GTTCACCTGG
ATGCTCATCC TGGTCACCCA TTTCCGCTTC CGCCGCCGCG TCGGCACGGA GGGGCTGGCC
TATCGCGCGC CCTTCTTCCC CGTGCCGCAA TGCATCGGCC TCGCCGGGCT GCTGGCGATC
GTCGCGGCGA TGCTCGTCAG CGGCGGGATT TGGCGGATCT CGGTCGCGAT CGGCGTGCCG
TGGCTGCTGC TGGTCGCGCT GCTCTTCCTG CTGCGCAAGG CCCGGTGA
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| Protein sequence | MDGTTQSGAR QREAGLERGL TRRQLTMIGI GGAIGTGLFM GSGLAIGYAG PGVLLSYLLA
AVISLAVMFS LAEMAVLNPT AGSFGTHAEL YISPLAGWIA RWTYWAEMVI LIGSEAVAVG
HYLSFWLPGL PVWLSILLSG GGILFVNMRA VGSFGTVEYW LSAIKVAAIL AFILLGLGMV
LGVGTPAIGL SNYMVDGGPL PFGMKGVWMG AMIAIFSFFG IEMIAVAAGE ADDPGKAVPH
AMRTLLVRLC LFYLLSIAII LAIVPWSSSG AAVVDQSPFV KVFAGFGIVG AASVMNFVVL
CAALSAMNSS LYMASRMLFS LARAGDAPAS FGVLNGAAVP ARAALVSGLG ILIAAAVALL
SPRAFEYMLG IALFGGLFTW MLILVTHFRF RRRVGTEGLA YRAPFFPVPQ CIGLAGLLAI
VAAMLVSGGI WRISVAIGVP WLLLVALLFL LRKAR
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