| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0502 |
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| Symbol | |
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| ID | 5199737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 539821 |
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| End bp | 542406 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580043 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001261008 |
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| Protein GI | 148553426 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0169233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.80601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCA ACGCCGGGGA TGGCTGGTCC CGACGCATCG ACGATCTGGC GCCCCGGATC
GCCCGCCACC ACGTCACGCT GCTGCGGGCG CCGGCCGGCC ATGGCAAGAG CGTCGCCCTC
GACCGGCTGC GCGCCGCGAT CGAGGCGGGC GGGGAGCGCT GCGCCGCGCT GCTGCTCGAC
AAGCGCGACG CCGATCTGAG CCGCTTCTTC CGGCGGGTCG CCCAGGCGCT GGGCGTCGAT
CCCGCCCAGC CCGATGCGGC GGGCGTGGCC GAGGCGGTGG AAGTCGGGGC CGCCGACGAC
CGCCCGGCCC TATTGTTCCT CGACGGCATC GACGAGGCGG GCGATGTCCT GCCCCCGGCG
TTGTCCGACC TGATCCTGTT CGCCCCCGGC CTGCGCTTCG TGATCGCCTC GCGCGAGAGC
AATCTTCCCG GGCTGGCGAA GCTGCGCGCG CAGGATCGGG TCGCGGTGAT CGGTCCCGAC
CAGCTCGGCT TCACCCGCGC CGAGGCGCTC GCCTTCCTCG GCGCCAGCGA GGATGCCGAC
GTCCTGCGTC TGGTCGACCG CTGCGAGGGC TGGCCGATCC TGCTCAAATT CGTGCGCGAC
GGGCTCGATG CCGGCGATCC GCCGACGCTG GCCGGCGACA TGGGGTCGGT GTCGGCCGGC
CTGATCGCCG ACTTCCTCGA CGAGCAGATC CTCGCCCCGC TGCTGCCCGA GGACGCCGAT
TTCCTCGAGC GGACGGCTGT GGTGTCGCGC TTCACGCTCG ATCTGGCGCG GCTGCTCGCG
CCCGAGGCCG CCGTCGAGCA ATCGGTCGAG CGGCTCGGCC GCGCGGCGGG GCTGCTCCAG
GCGCGGCGGC TCAACGGCTT GTGGTATCAC GTCAATCCGA TGCTCCGCGC GACGCTGATG
CGGCGCTTCC AGGCGCGGAT CGGGTCGGAC GTCCGCCGCG TCCACCGCAT GATCGAGGCG
TGGATGATCG AGCATGACGC GGTCGACGAG GCGGTGCTCC ACGCCTGCCT CGCCCAGGAT
TATGACGAAT GCGTCCAGCT CGTCCGCCGC TTCGGACCCG CCAATCTCTC GATGCGCTAC
GGATTGCGGA CGCTCCGCTC GGTGCTGGCC GCGCTGCCGC GCCACTATCT CGACCATGAA
CCCGCGCTCG GCATCTCGGA GGCGCTGGTG CTGTCGAAGG AAGGCCGCGT GTCCGACGCC
CGGCGGCTGA TCCACCGGCT GCGCGACAAG GCCGGCGGCC ATGCGGCGGC GGCCGGCGCG
CTCGGCGATC TCGACCTGCT CGACATCATG CTCGCCTGCC ATGCCGATCA GCCGCTCATG
CCCGGGCTCG CCGACCGGCT GTCTGCGGTC GCCGCGGCGC TGCCGCACGA CGATGTGATC
CATCAGGGCT GGGTCCAGAA CCTGATCTGC CGCGTCCATC TCAGCCTCGG CAATTTCACC
CATGCCGCCG CCGCCGGGAT CGCCGCCGAA CATTATTATG CCCGGTCGGA CTCGCGCTAC
GGCCAGTTCT TCGTCCACCT CCACCTCGCC TCGACGCGGA GCTGGCAGGG GCTCTACGAT
CAGGTCGGCA GCCATATCGA CAGCGCCGAA TCGATTGCCG TCCAGCATTT CCCCGAAGAC
CCGGCGATGG CGACGCTCTG CCGGCTGCTG CGCGCCGAGC TGCTGTTCGA CCAGGGCCAG
GCCGATCTCG GCATCGACCT GCTGCCCGCG TTGCAGAGCG CCGAGAACAA CGACGGGTGG
CTCGACCTGT TCGTCAGCGG CTATCGCACC GCCGCGCTCC ACGCCTTTCG CGGCGGCGGC
CTCGAAGCCG CGCTGGCGGT CACCCGGCGG GGCGACGAGG CGGCGCTGCG CATCGGCCTG
CCGCGCCTCG CGCTGGTCAT GCAGATCCTC CGCGCCGAGC TGCTGTCGCT CGCCGGGCAT
CGCAACCAGG CGGGCGCCGC GCTGCGCGCG ATCCGGGTAC CGAGCAACGG CGAGGACGAC
GCGCGCTGGC GCGAGCGGCT CGCGCTCGGC ATCGCCAATG CCCGGCTGCT GATCCATTCG
CGCCAGTTCC GCCGGGCGAC CGTGCTGCTC GACACGCTGG AAGGCGAATG CGAGCGCCGG
GGGATCGGCC GCCTCGTCGC CAAGGTGGGG CTGCTGCGGG CGCTGCTGCT CGCCTGCTCG
GGCAGCCCGC AGCGCGCGAT CGCGACGCTG GTCGAACTGC TCCAGTCGGC GCAGCAGCCG
TCGATGCAGG CCTTCATCGA GGAGGGCGAA CTGATGGCGC GACTCTGCTC GCTGGTCGCC
CATCATTCGC AGCGCCACGC CCTCGGCCCG GAGGCGAGCC GTTTCCTCGC CGAGCTGTCG
GAACGGCTCG GCCAGAGCTA CGAGCATGTC ATCGACCGCG ATGCCGGCGG TTCCTATCTC
AGCGCCCGCG AGCGCGAGAT ATTGCTCAGC CTTGCCCAGG GCGAATCGAA CAAGTCGACC
GCCGAGCGCC TCAACGTCTC CGAAGCGACG GTGAAATTCC ACCTCCAGCG CATCTATCGC
AAGCTCGGCG CCCACAACCG TGTCAAGGCG ATCGCCGTCG CCCAGCAACA GGGCCTGCTT
TACTGA
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| Protein sequence | MTINAGDGWS RRIDDLAPRI ARHHVTLLRA PAGHGKSVAL DRLRAAIEAG GERCAALLLD
KRDADLSRFF RRVAQALGVD PAQPDAAGVA EAVEVGAADD RPALLFLDGI DEAGDVLPPA
LSDLILFAPG LRFVIASRES NLPGLAKLRA QDRVAVIGPD QLGFTRAEAL AFLGASEDAD
VLRLVDRCEG WPILLKFVRD GLDAGDPPTL AGDMGSVSAG LIADFLDEQI LAPLLPEDAD
FLERTAVVSR FTLDLARLLA PEAAVEQSVE RLGRAAGLLQ ARRLNGLWYH VNPMLRATLM
RRFQARIGSD VRRVHRMIEA WMIEHDAVDE AVLHACLAQD YDECVQLVRR FGPANLSMRY
GLRTLRSVLA ALPRHYLDHE PALGISEALV LSKEGRVSDA RRLIHRLRDK AGGHAAAAGA
LGDLDLLDIM LACHADQPLM PGLADRLSAV AAALPHDDVI HQGWVQNLIC RVHLSLGNFT
HAAAAGIAAE HYYARSDSRY GQFFVHLHLA STRSWQGLYD QVGSHIDSAE SIAVQHFPED
PAMATLCRLL RAELLFDQGQ ADLGIDLLPA LQSAENNDGW LDLFVSGYRT AALHAFRGGG
LEAALAVTRR GDEAALRIGL PRLALVMQIL RAELLSLAGH RNQAGAALRA IRVPSNGEDD
ARWRERLALG IANARLLIHS RQFRRATVLL DTLEGECERR GIGRLVAKVG LLRALLLACS
GSPQRAIATL VELLQSAQQP SMQAFIEEGE LMARLCSLVA HHSQRHALGP EASRFLAELS
ERLGQSYEHV IDRDAGGSYL SAREREILLS LAQGESNKST AERLNVSEAT VKFHLQRIYR
KLGAHNRVKA IAVAQQQGLL Y
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