| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0435 |
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| Symbol | |
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| ID | 5199719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 461340 |
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| End bp | 462518 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579974 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_001260941 |
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| Protein GI | 148553359 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.29183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGAAA CCGATCACGC GCGTCTGACA CCCCCCGAGG GCGCAACGGG CGTTTTGGTT
CTCGGCGACG GGACATTGAT CTGGGGCAGG GGATTCGGGG CAGAGGGCGA CGCCGTCGGC
GAGGTCTGCT TCAACACCGC GATGACCGGC TATCAGGAGG TGATGACCGA TCCCTCCTAT
GCCGGGCAGA TCATCACCTT CACCTTCCCG CACATCGGCA ATGTCGGCAC CAATGCCGAG
GATGTCGAGG CAACCAACCC CCACGCGCTC GGCATGGTCG TGCGCGAGGA CGTCACCGAT
CCCGCCAATT TCCGCAGCAG CCAGCATCTC GACGCCTGGC TGAAGGCGAA CGGCCGGATC
GGCGTCTCGG GCGTCGACAC CCGCGCGCTC ACCCGCGCGA TCCGGATCAA CGGCGCGCCG
AACGGCGTCA TCGCCCATAA CGCGCAGGGC CGCTTCGACA TCGAGGCGCT GCGCCGGAAG
GCCCGCGAAT GGCCGGGGCT GGAGGGCATG GACCTCGCCA AGGAGGTCAG CGCCACCCAG
ACCTACAAGT GGAGCGACGG CCTCTGGGCG CTCGGCGAGG GCTATGACCT CGACGCCGCG
CCCGCCGACG CGCCGCACGT CGTCGCGATC GACTATGGCC TGAAGCGCAA CATCCTGCGC
AACCTGGTCG CCGCCGGGGC GCGGGTGACG GTCGTCCCCG CCACCGCCAG CTTCGACGAG
GTGATGGCGC ACAGGCCCGA CGGCGTCTTC CTGTCGAACG GCCCGGGCGA CCCGGCCGCG
ACCGGCGCCT ATGCGGTGCC GGTGATCCGC AAGCTGCTCG ACGTCGGCAC GCCGCTGTTC
GGCATCTGCC TCGGCCACCA GATGCTCGGC CTCGCGGTCG GTGCGAAGAC CTACAAGATG
CACCAGGGCC ATCGCGGCGC CAACCATCCG GTCAAGCGCA CCGACGACGG CCAGGTCGAG
ATCACCAGCA TGAACCACGG CTTCGCGGTC GACACCGACA GCCTGCCGGC CAATGCCGAG
GCCACCCATG TCTCGCTGTT CGACGGATCG CTGGCGGGCC TTCGCCTGAC CGACAAGCCG
GCGTTCAGCG TCCAGTACCA CCCCGAAGCC AGCCCCGGCC CGCAGGACAG CCATTATCTG
TTCGAGCAGT TCGTCGCCCA GCTGAAGGCG AAGGCGTGA
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| Protein sequence | MAETDHARLT PPEGATGVLV LGDGTLIWGR GFGAEGDAVG EVCFNTAMTG YQEVMTDPSY
AGQIITFTFP HIGNVGTNAE DVEATNPHAL GMVVREDVTD PANFRSSQHL DAWLKANGRI
GVSGVDTRAL TRAIRINGAP NGVIAHNAQG RFDIEALRRK AREWPGLEGM DLAKEVSATQ
TYKWSDGLWA LGEGYDLDAA PADAPHVVAI DYGLKRNILR NLVAAGARVT VVPATASFDE
VMAHRPDGVF LSNGPGDPAA TGAYAVPVIR KLLDVGTPLF GICLGHQMLG LAVGAKTYKM
HQGHRGANHP VKRTDDGQVE ITSMNHGFAV DTDSLPANAE ATHVSLFDGS LAGLRLTDKP
AFSVQYHPEA SPGPQDSHYL FEQFVAQLKA KA
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