| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0305 |
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| Symbol | |
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| ID | 5199116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 322843 |
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| End bp | 323589 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640579845 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001260814 |
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| Protein GI | 148553232 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.21038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCC GCTTCGAGGG CAAGGTCGCG ATCGTCACCG GCGCCGGCGC CGGGATCGGC
CGCGCCTGCA TGGCGCGGCT CGCGAGCGAA GGCGCGATCG TGGTCGGCAC CGACGTCAAC
CAGGCCAAGC TCGACGACGC CGTCGCGGCG GCCGGCGCCA ACGCCCATGG CATGATCTGC
GACGTCGCCG ACCAGGCGGC GATCGACGCC ATGGTGGCAG ATGTCGTCGC GCGCTTCGGC
GGGGTCCACG TGCTGATCAA CAATGCCGGG ATCGGCAATC CCCGGCGGCT CCGACTCCAC
GAGCAGCCGC CAGAGGACTG GGACAAGGTG ATGGGGGTCA ATGTGCGCGG CGTCTACCTA
ATGCAGCGCG CGGTGATCCC GCACATGCTG CGCCAGGGCG GCGGATCGAT CGTCAACATG
GCCTCGACCG GCAGCTTCCG CGCGACCGCG CTGTCGAGCC CCTACATCAC CTCCAAGGGC
GCGGTGCTGA TGATGACCCG CGCCGCCGCC GCCGACTATG CCCGCGACAA TATCCGCATC
AACGCGGTCT GCCCCGGCAC CACCAACACC GACATCCTTG CCAACAGCAG CGCCGAGATG
ATCGAGATGC TCGTCGCCCG TTCGCCGCAG GCGCGGCTGG GCGAGCCCGA GGAGGTCGCC
GCGCTGGTCG CCTTCCTCGC CTCGGACGAG GCGCCGCACA TCCATGGCGG CGCCTATCTG
ATCGACGGCG GCCGCAGCGC GGTCTGA
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| Protein sequence | MNRRFEGKVA IVTGAGAGIG RACMARLASE GAIVVGTDVN QAKLDDAVAA AGANAHGMIC
DVADQAAIDA MVADVVARFG GVHVLINNAG IGNPRRLRLH EQPPEDWDKV MGVNVRGVYL
MQRAVIPHML RQGGGSIVNM ASTGSFRATA LSSPYITSKG AVLMMTRAAA ADYARDNIRI
NAVCPGTTNT DILANSSAEM IEMLVARSPQ ARLGEPEEVA ALVAFLASDE APHIHGGAYL
IDGGRSAV
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