| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39300 |
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| Symbol | |
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| ID | 8389251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4253845 |
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| End bp | 4254501 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977940 |
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| Product | haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED |
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| Protein accession | YP_003135699 |
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| Protein GI | 257057867 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCGGG TGGACGCAGT GGTATTCGAC CTCGACGGAG TCCTCGTGGA TTCCGAGCGC
ATGTGGGACG AGGTGCGCCG ATCGGTGGTC GCCGAACACG GCGGGCGGTG GCGTGAGGAG
GCCACCCGGA CGATCCAGGG GATGAGCACG CCGGAGTGGG CGCGCTACCT CGTCGAGGAA
CTCGGCACCC GGCTCACCGC GGACGAGGTG GCCGACACCG TGATCCGCGA GATGGCGGCG
AGGTACGAAT CGGGGCCGCC CATCATCGCG GGCGCGGAGA AGACGGTGCG AGCGGTCGCC
GAGCGCTATT CCGTCGCCAT CGCCAGTTCG TCGCCACCGA CGCTGATCGA CGCCTTCCTC
TCCGCGGCCC GGCTCACGGA TCTTGTGCGC GTGGCCGTGT CGAGCGAACA GGTCGACGCG
GGTAAACCCG CGCCCGACGT CTATTTGGAG GCGGCCCGCC GGTTGGAGGT CGCACCCGTG
CGGTGTGCCG CCGTCGAGGA CTCGACCAAC GGCCTGCGGT CCGCGCTCGC GGCCAGGATG
ACGGTGATCG GCGTACCCAA TCCTCACTAC CCGCCCGATC CGAACGTCCT CGCCGAGGCC
CACGCCGTCA TCGACGACAT CACCGAACTG CCGGAGACCC TGAGCCGAAT ACGGTGA
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| Protein sequence | MSRVDAVVFD LDGVLVDSER MWDEVRRSVV AEHGGRWREE ATRTIQGMST PEWARYLVEE
LGTRLTADEV ADTVIREMAA RYESGPPIIA GAEKTVRAVA ERYSVAIASS SPPTLIDAFL
SAARLTDLVR VAVSSEQVDA GKPAPDVYLE AARRLEVAPV RCAAVEDSTN GLRSALAARM
TVIGVPNPHY PPDPNVLAEA HAVIDDITEL PETLSRIR
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