Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_39110 |
Symbol | |
ID | 8389232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 4233623 |
End bp | 4234069 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977921 |
Product | hypothetical protein |
Protein accession | YP_003135680 |
Protein GI | 257057848 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.109575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.507161 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTCC ATGCCGAGGA CGTTCCGACG GGGCGGATCG AGTGCCCCGG AACGCACTCG ACCAGCTGGG TGACAGTGGG AACCGGAGCG GGGCCGGATG CGTCGGAATC CGACGTGGAA CCCGTGGGAG CAACTGTGGC GCCGATCGAC CACGAACGGG CGCTCGCTGA TCGTCACGCA CTCATCCAGC TGTGTCTCTA CGCGATGGAC CGGGCTCGTA GCGGGGGTGT CGCCGAACGG ATCGAGCAGG GGCTGGCGAG TGTCGGGGTA CACGCCTTGC GGCCCGACGG CCAGCGTTTC GATCCGTCGT TGCACGAGGC CGGCGGCGCC GTGCCGACCG ATGACGCGGC GCTGGAGGGC ACGGTGGCCG AGACCGAGGT GGTGGGCTTC GTCGACCACG ATCGGCTGTT GCGGGCACCG GTCGTCACCG TCTACACCCG CCGCTGA
|
Protein sequence | MSVHAEDVPT GRIECPGTHS TSWVTVGTGA GPDASESDVE PVGATVAPID HERALADRHA LIQLCLYAMD RARSGGVAER IEQGLASVGV HALRPDGQRF DPSLHEAGGA VPTDDAALEG TVAETEVVGF VDHDRLLRAP VVTVYTRR
|
| |