Gene Svir_38730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38730 
Symbol 
ID8389194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4191236 
End bp4191949 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content67% 
IMG OID644977884 
Productglycopeptide antibiotics resistance protein 
Protein accessionYP_003135643 
Protein GI257057811 
COG category[V] Defense mechanisms 
COG ID[COG4767] Glycopeptide antibiotics resistance protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGTACG GATCACTCGC CTTCGCCGTC GTGTGGGGTG TGCTGCTCGT GCCCCAGCTC 
ATCAGCCATT ACGCCCGGTT CGGCAGGGTA CACGGCAGGC GTGTCGTCAC CACCGCCGTC
GTGACGCTGT ACTCCTGTCT CGCCGTGGCG GTGGTGCTGT TGCCGCTGCC CGCGCCGGGT
GATGCGCGGT TGACGCAGAC GGTGCAGCTG ACACCGTTCC AGTGGATCGC CGATGTGGCC
ACGGAACTGG ACGAACACGG CCTGTCCTAC GCGCACGCCC CGTTCACCCT GGCCTTCCAA
CAACTGGCGA TGAACGTGTT GCTGTTCGTC CCGTTGGGGA TGTTCGTGGT GTTGTTGCGA
CGGCGCGACG TCCGGTGCGC GACCCTGACC GGTCTTGCGA TGTCACTGCT GGTGGAGGTC
ACCCAACTCA CGGCGAATTT CGGCACCGCA CCGTACGCCT ACCGCATCTT CGACGTCGAC
GACCTGTTGG CGAACACGGC CGGGGCCGCG CTCGGCGGCA CGGCGGCCGT GCTGTTCCTG
GCGCTGCGAC GGCTCAAGAG GACGAACGCC GCAATCCGGG AAGCTGGAAC CGTGACGGTG
CCACGGGTGG CGGCTCCAAC TCGCCCAATC GCACCAGGTA CTCCCGCCGT AGGCGGTCCC
GTCGACGTGC CTCTCGTTGA TCTTCGTACA CGACCGTTGC CGCGGCCGCG ATGA
 
Protein sequence
MTYGSLAFAV VWGVLLVPQL ISHYARFGRV HGRRVVTTAV VTLYSCLAVA VVLLPLPAPG 
DARLTQTVQL TPFQWIADVA TELDEHGLSY AHAPFTLAFQ QLAMNVLLFV PLGMFVVLLR
RRDVRCATLT GLAMSLLVEV TQLTANFGTA PYAYRIFDVD DLLANTAGAA LGGTAAVLFL
ALRRLKRTNA AIREAGTVTV PRVAAPTRPI APGTPAVGGP VDVPLVDLRT RPLPRPR