Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_37800 |
Symbol | |
ID | 8389101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 4100433 |
End bp | 4101323 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644977791 |
Product | predicted dehydrogenase |
Protein accession | YP_003135551 |
Protein GI | 257057719 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.176276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACGCGC GGGTGAGAGT CGGACTCGTC GGCGCGGGGT CGTGGGCCAG GCGAGTGCAC GCCCCCGGTC TTGCCGACCA TCCCGACACC GTACTGAGCG CCGTGTGGAC CCGCCGGCCC GAGGCTGCGG CCGCGTTGGC GGACGAGCAC GGTGCCAGGG CATGCGGTAG TTTCGCCGAG TTGCTCGAAC GGGTGGACGC CGTCGCCCTC GCCGTCCCGC CCTCCGTGCA GCCCGAACTG GCCGTCGCCG CGGCCGAGGC GGGTAAACAC CTGATCCTGG AGAAACCGCT CGCCACCAGC GTGGAGCAAG CCCAACGGGT CGCCCGGGCG GTCTCCGAAG CAGGTGTCGT GGCCCTCGTG CTGCTCACCC TGCGCTACGC CCGACGTACT CGCGACTGGC TTGCCGAACT CGCCGAAACG GGCGGATGGA CCGGTGGAAG CGCCAGGTGG CTGTCGGGTG CGTTACTCGG CGACCAATAC GGACGTGCCG CGTGGCGCCA CGAGATCGGC GCACTCGGCG ACATCGGCCC GCATGTCTTC GACCTGATGT CCGCTGCTTT GGGTGACATC ACCTCGGTCG TAGCGGCGCG CTGTGACGAC AACGGGCTGT GGCACGTCAT GGTGGAACAC GCCGGAGGGG CGACGAGCAC GGCGAGCCTG GCCTCCCGCC TGCCGATCAT GCCGACGGCC ATCGAGTTCG CAGTGTACGG CGAACACGGA CTCCGCGTCC TGGGCCGGGA ACCCGACTCC CAGGCGGCGT CGTACGCGGC GCTGCTGGAC GACTTCACCG CGATGATCGA CAGCGGTGTA CGGGAACACC CCTGCGACGT GCACAGGGGT GTTCACCTGC AACGCATCCT GGCCGAATGC CACGAACTCG CGGGACGGTG A
|
Protein sequence | MNARVRVGLV GAGSWARRVH APGLADHPDT VLSAVWTRRP EAAAALADEH GARACGSFAE LLERVDAVAL AVPPSVQPEL AVAAAEAGKH LILEKPLATS VEQAQRVARA VSEAGVVALV LLTLRYARRT RDWLAELAET GGWTGGSARW LSGALLGDQY GRAAWRHEIG ALGDIGPHVF DLMSAALGDI TSVVAARCDD NGLWHVMVEH AGGATSTASL ASRLPIMPTA IEFAVYGEHG LRVLGREPDS QAASYAALLD DFTAMIDSGV REHPCDVHRG VHLQRILAEC HELAGR
|
| |