| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33020 |
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| Symbol | |
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| ID | 8388626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3582677 |
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| End bp | 3584017 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644977326 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003135095 |
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| Protein GI | 257057263 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.471979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCA CTTCGATATC GCCGGACAAG GCGAAGAAGG CGAGAACCGT CGCGGTCGCC
AGCTACATCG GCACGACCAT CGAGTGGTAC GACTTCTTCA TCTACGGCGT CGCCGCGACG
CTGGTCTTCC GCACCCAGTT CTTCCCGGAG TTCTCCGAAC TCGGGGGTAC GCTGGCCGCG
CTTGCGACCT TCGCGGTCGG TTTCATCGCA CGTCCCATCG GCGGGATCGT GATGGGGCAC
TTCGGTGACC GGGTCGGTCG TAAGTCGATG CTCGTCACCT CGCTGCTGAT CATGGGCATC
GCGACGACCC TCATCGGCGT GCTCCCGACG TACGACCAGA TCGGTGTCTG GGCGCCCATC
CTGCTCGTCG TGCTGCGGCT CGCCCAGGGC GCCGGTGTCG GGGGTGAATG GGCGGGTGCG
GTGCTGATGG CCGTCGAGCA CGCACCGCCG AAGCGACGGT CGTTGTACGG CTGCTTCCCG
CAGTTGGGTC TGCCCTCGGG AATCCTGCTG TCCCAGTTGG TCTTCCTCGT GCTCACGGGC
GTGTTGCCGG AGGCTGCGTT CAGCGCCTGG GGTTGGCGTA TCCCCTTCCT GATCAGCGCG
GCGTTGATCC TGGTCGGACT GCTCATCCGG CTGCGGATCG AGGAGAGCGC GGACTTCGAA
CGCGTCCGCG CGGCGGGGCA GGTCGAGAAG CTGCCGGTGG TGCAGGTCTT CCGGCGTACC
CCGCTGCAGG TGCTCGTGGG TAGCGTGGCT TCGATCGCCG CTCCGACCCT GGGCTACCTG
GTGTCGGTCT ACATGGTGTC CTACGGCACC AACACCCTCG AGCTGCCCAC GACGACCATG
CTGTGGACGC TCGTCGGCGT GAGCGTGTTG TGGAACGGCA TCATGTTGGC GGCCGGTCTG
GCCGGTGACG TGCTGGGCCG CAAGCCGACG TTCCTCATCG GGGCCGCGCT GTCGGTGGTG
TGGGCCTTCC CGATGTTCTG GCTCGTGGAC ACCGGGTCCC TCTTCTGGAT CTTCGTGGCC
CTGGTCGTCA TCACCGCGGC CAACTCCATC ATGGCGGGAC CGCAGCCGGC ACTGGTCACG
GAGATGTTCC CCGTTCGGCT GCGCTACAGC GGGTCGTCGA TCTGCTACCA GATCGGATCG
ATCATCGGCG GCGGTGTGGC CCCGATCCTG GCGACGACAC TGTTCGCCAA GTTCGGCAAC
CCCGCGGTCT CGACGCTGAT CGTCGTCATC TCGCTGCTCA GTCTGTTCGC GATCCTGTTC
GCGGGCCAGC GGATCCTGCA AGCACAGGAA CCGACGGCCC CGCAGGCCCA GCAGAGCCGA
CTGCAACCGC TCGCCGAGTG A
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| Protein sequence | MSSTSISPDK AKKARTVAVA SYIGTTIEWY DFFIYGVAAT LVFRTQFFPE FSELGGTLAA
LATFAVGFIA RPIGGIVMGH FGDRVGRKSM LVTSLLIMGI ATTLIGVLPT YDQIGVWAPI
LLVVLRLAQG AGVGGEWAGA VLMAVEHAPP KRRSLYGCFP QLGLPSGILL SQLVFLVLTG
VLPEAAFSAW GWRIPFLISA ALILVGLLIR LRIEESADFE RVRAAGQVEK LPVVQVFRRT
PLQVLVGSVA SIAAPTLGYL VSVYMVSYGT NTLELPTTTM LWTLVGVSVL WNGIMLAAGL
AGDVLGRKPT FLIGAALSVV WAFPMFWLVD TGSLFWIFVA LVVITAANSI MAGPQPALVT
EMFPVRLRYS GSSICYQIGS IIGGGVAPIL ATTLFAKFGN PAVSTLIVVI SLLSLFAILF
AGQRILQAQE PTAPQAQQSR LQPLAE
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