Gene Svir_30530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30530 
Symbol 
ID8388377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3306222 
End bp3307019 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content63% 
IMG OID644977082 
Producthypothetical protein 
Protein accessionYP_003134855 
Protein GI257057023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.859475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGC GGGCTCGGCG ATTACTTTCA ATAATAGGAA TTTCTGTTCT GACCTTAGTG 
GGAGGCGCTG TCTCGGCGAG CGCCGCTCCC GCTGAGGTGA ATTACGTCGC CCTCGGCGAT
TCCTACTCCT CCGGGGTTGG CGCCGGGTCA TACGGAGACT CGGGGAGTTG CAGGCGTAGT
GCCAATGCTT ATCCGCAGTT GTGGGCGAAT TCCCATGCGG TGTCCAGTTT CAAATTCGTC
GCCTGCTCCG GTGCCGTGAC ATCCGATGTC ATCAACCAGG CGTCGCACGT GGACTCGAGC
ACCACCTTCA TCACCGTTTC CGTCGGTGGT AACGACGCCG GCTTCGCCGA CGTGATGGTC
GACTGCACGC TCGGTTCGGA CAGCTCGTGT GTGAACCGCG TGGAGGAGGC CAAGCAGTTC
GCCAGGAACA CGCTGCCCGG CAGGCTCGAC AACGTGTACC AGACGTTGAC CAGCAGGGCG
CCGAACGCGG AGATCGTGGT GCTGGGTTAT CCCCGGTTCT ACCAGATCGG CGGCACGTGC
AAGGTGGGTC TGAGCGACAC CAAGCGCGCG GCCATCAACT CGGGCGCGGA CACGCTCGCC
GAGGTCACCG CCGAGCGGGC GGCGGCGTGG GGATTGAAGT TCGTCGACGT GCGCGGTGCC
TTCAGCGGGC ATGAGATCTG CTCGAGCGGC GATTGGTGGT TGCACAGTCT CACCTGGCCC
ATCGTGGAGT CGTATCACCC GACCGCTGAC GGTCAGCGTC TCGGCTACCT CGCCGCACTG
CAGAGCGTCA CCGGCTGA
 
Protein sequence
MKARARRLLS IIGISVLTLV GGAVSASAAP AEVNYVALGD SYSSGVGAGS YGDSGSCRRS 
ANAYPQLWAN SHAVSSFKFV ACSGAVTSDV INQASHVDSS TTFITVSVGG NDAGFADVMV
DCTLGSDSSC VNRVEEAKQF ARNTLPGRLD NVYQTLTSRA PNAEIVVLGY PRFYQIGGTC
KVGLSDTKRA AINSGADTLA EVTAERAAAW GLKFVDVRGA FSGHEICSSG DWWLHSLTWP
IVESYHPTAD GQRLGYLAAL QSVTG