Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_25450 |
Symbol | |
ID | 8387869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2738934 |
End bp | 2740715 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644976585 |
Product | DNA replication and repair protein RecN |
Protein accession | YP_003134366 |
Protein GI | 257056534 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGCCG AGATGCGTAT CCAGGGCCTC GGAGTGATCG ACGAGGCCGT GCTCGAACTG CACCCCGGAT TCACTGTGGT CACCGGTGAG ACCGGGGCGG GCAAAACCAT GGTCGTCACC GGCCTGCATC TGCTCTCCGG TGGGCGTTCC GACGCATCCA AGGTCCGGGC GGGATCGGCG AAGGCCGTGG TGGAAGGCCG TTTCACCGAG ATCTCCGGAG AACAGGCGCT GCGCATCCTC TCGGACTCAG GTGCCGAGAC CGACGAGGAC GGCAGTGTGA TCGCGGTGCG GTCGGTCGGG GCCGACGGTC GTTCCCGTGC CCATCTCGGG GGCCGGTCTG TGCCCGTGGG CGTGTTGGGG AAACTGTCGG AACAACTCCT GGCCGTTCAC GGACAGAACG ACCAGTTGCG ACTGTTGCGT CCCGCCGAAC AGCGTGCCGT CCTCGATCGG TTCGCGGGTG AGGATGTCGC CGGGCCATTG GCCGACTACC GAAAGACCCG CCAGGAATGG CTTTCGGTGG CACGTGAGTT GGAGGAACGG CGCAGTCGGT CGCGGGAACT CGCGCAGCAG GCGGATCTGC TGAGACACGG ACTGGCCGAG ATCGAGGCCG TCGATCCCGC ACCCGGTGAG GACGTGGAAC TCACCGAGCA GGTCAAACGG TTGGCCGCCG TGGACGAGCT GCGGGATACC GCCACCGCCG CGCTGATCGC GGTCACCGGA GCCTCCGACG GCGATCCCGA CGTGCCCGGG GCTTTGGGGC TGCTCGCGGA GGCCCGACGG AGACTCGGCT CGGCCGAGGA CGCCACGCTA CGGGAACTGG AACCACGCGT TTCGGAGGCC GCGGTACTGC TCGACGAGGT CGGTCGTGAG CTCACCGCCT ACCTCGACAC ACTCGACGCC GATCCGGAAC GACTCGAAGC GATCCTGGCG CGGCAGGCGG AGCTGAAGAA GCTCACGCGT AAATATGCGG CCGATGTGGA CGGTGTACTC GCGTGGGCCG AGGACGCGCG TGCCAGGCTG GCCGGAATGG ACACCTCGGA GGAAGCGCTC GAGGAGCTGG CCGCTCGTCG GGATGCGCTG GCCGAGGAAT TGGCCGGACA TGCCGCACGG TTGTCGGCCG CACGCCGCAC GGCCGCCGCC GAACTGGGGA AGCAGATCAC CACTGAACTG TCGAGCCTGG CGATGGGGCA GGCAGCGCTC GAGGTCACCG TGCGCGGTAA ACAGACCGAT GCGACCGATC CACTCGCCTT GACCGTCGAC GGACAGACCG TGACCGCCGG CCCCGACGGG GTGGACGAGA TCGAATTGTT GCTGCGTGCG CACGCGAAGG CCCCGGCACT GCCGGTGCAC AAGGCCGCCT CCGGCGGCGA GCTGTCTCGC GTGATGCTCG CCATCGAGGT GGTACTCGCC CACACCGACA CGGTCCAGAC GTTGGTGTTC GACGAGGTCG ACGCCGGAGT CGGAGGTCGT GCCGCGGTCG AGATCGGCCG CAGGTTGGCG AGGTTGGCCC GCACCCACCA GGTGCTGGTG GTGACTCATC TCCCGCAGGT CGCGGCGTTC GCCGACCGGC ACTTGATGGT GGACAAGGGG CTGTCGGACG GGGTGACCCG AAGTGGTGTG CGCACCCTCG ACGATGAGGA GAGGGTCACC GAACTGGCTC GGATGCTGGC AGGCCTCGAC GACACCGAGA CCGGCCGGGC CCACGCGGAG GAGTTGCTGA ACTCGGCCAA GGAGTTCAAG GCCACGATGG GAGACAAGGC CGGGTCGCGG GTGCTCGAGT GA
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Protein sequence | MLAEMRIQGL GVIDEAVLEL HPGFTVVTGE TGAGKTMVVT GLHLLSGGRS DASKVRAGSA KAVVEGRFTE ISGEQALRIL SDSGAETDED GSVIAVRSVG ADGRSRAHLG GRSVPVGVLG KLSEQLLAVH GQNDQLRLLR PAEQRAVLDR FAGEDVAGPL ADYRKTRQEW LSVARELEER RSRSRELAQQ ADLLRHGLAE IEAVDPAPGE DVELTEQVKR LAAVDELRDT ATAALIAVTG ASDGDPDVPG ALGLLAEARR RLGSAEDATL RELEPRVSEA AVLLDEVGRE LTAYLDTLDA DPERLEAILA RQAELKKLTR KYAADVDGVL AWAEDARARL AGMDTSEEAL EELAARRDAL AEELAGHAAR LSAARRTAAA ELGKQITTEL SSLAMGQAAL EVTVRGKQTD ATDPLALTVD GQTVTAGPDG VDEIELLLRA HAKAPALPVH KAASGGELSR VMLAIEVVLA HTDTVQTLVF DEVDAGVGGR AAVEIGRRLA RLARTHQVLV VTHLPQVAAF ADRHLMVDKG LSDGVTRSGV RTLDDEERVT ELARMLAGLD DTETGRAHAE ELLNSAKEFK ATMGDKAGSR VLE
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