Gene Svir_22430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22430 
Symbol 
ID8387567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2414768 
End bp2415484 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content69% 
IMG OID644976296 
Productprotein of unknown function DUF81 
Protein accessionYP_003134078 
Protein GI257056246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.745875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.877077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACG TGCTGTTGTC GGGCGCGGCC GTGTTCGCCG GCGCGCTCGT ACAGGGTGTC 
GTCGGTTTCG GGATGAACCT GATCGCCGCT CCCCTGCTGG CGCTGGTGGA TCCGGACCTG
GTCCCGGTTC CCCTGCTGAT GATCGCGCTG GCCCACGCCT TGTTGGCCGT GGTCAGGGAA
CATCGCGACA TCGATTGGCA AGGTGTGGGT TTGGTGTTGC TGGGCAGGCT ACCCGGGACC
GCGTTGGGTG TGCTCGCCGT GGCGTTGCTC CCGCAGCGCC CCTTCGCGGC GATCGTGGGT
GTGGCGGTGT TGGTGTGCGT GGCGCTGTCG GTGGTGTCAT GGACACCGCG TCCCACCACC
CGTGCGCTGT TGGTGGCGGG CGTGGCCAGT GGGACGCTCG GCACCGCATC GTCGATCGGC
GGGCCACCGA TCGCGTTGGT GTACCAGCAC GAGTCGGGGC CTCGGATCCG GGCGACGCTG
GCGATGTGCT TCGGACTCGG CTCGTCGATG TCCCTGCTGG CACTCGGCGT CGCCGGCCAG
TTGTCCACCG ATCATTCCGT CACGGCGTTG TGGCTGTTGC CGTTCCTCGT CGCGGGGTTC
GCGTTGTCCG GGCCCGCTCG TCGATTCCTG CCCGACGGGA AGCGGATGCG GCTGGCGGTG
TTGACGGTGG CCGGAGCCAG TGCGCTCGCG CTGGTGGTGC GCAGCATCGT CGGATAA
 
Protein sequence
MPDVLLSGAA VFAGALVQGV VGFGMNLIAA PLLALVDPDL VPVPLLMIAL AHALLAVVRE 
HRDIDWQGVG LVLLGRLPGT ALGVLAVALL PQRPFAAIVG VAVLVCVALS VVSWTPRPTT
RALLVAGVAS GTLGTASSIG GPPIALVYQH ESGPRIRATL AMCFGLGSSM SLLALGVAGQ
LSTDHSVTAL WLLPFLVAGF ALSGPARRFL PDGKRMRLAV LTVAGASALA LVVRSIVG