Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_20500 |
Symbol | |
ID | 8387377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2187725 |
End bp | 2189128 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644976111 |
Product | hypothetical protein |
Protein accession | YP_003133893 |
Protein GI | 257056061 |
COG category | [R] General function prediction only |
COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.49751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCATCT TCCTCGACGT GGCCGTGGTG CAGATCCAGT CCTGGTTGGC CAGAACCCCG CACCTGCGCG GCCGACGCGG CGCCTCGCGC ATGATCCGGG AGGCAACCAT GGCCGAGGCC GTGGACGAGA TGTTGACCAA GTTCACCGAC AAGGCGCGAC GCAACATCGC CTACGGGGAC ATCGACGGCG TCATCGCGCT GGAGATCCTC CGCGACGACG CCGTGGACGA AGTCGAGCGA CACGTGATGC GCCACCTCCG CAAGAGATTG CCCGCGGCGC CGCTGCGCTC CACCCGGTGG GAGGGGCAGG ACTCGCTGGA CGCGCATGCC GCCGACGAGC CGCTCGTCAC CCACGACTGG CCCGCGCCGG TGCCGGAGTG GCCCGCGAGC AAACCCTGCG ACTGGTGCCG CTCATGGCCG GCCAGCCGCG AAGCCACGGT CGGAGCGGGA GACGACCGGA AACAAGTGCA GTTGTGTGAG GACTGCGGAA AGCGTCACAG ATACGCCGGC TTCACCACCA GCACGACCGC GACATTGAAA CCCGGTGTCG AACGCGACCT GCTGGAACGT TGGCACAAGG AGCACAACAG CAAACCCACG CTGCCGGACA AATTCCCGGA TCTGGCGCTG TTGGGCAAGG AGAACGACAA CACACACCTG GCCACCGTCT ACGCCGACGG CAACGCGGTC GGCAAGCTCA ACAAGGAACT TCGCGACCTG CGGCGTAACG GCATCGGCAC GAACTTCGAT CTGCCCCAAG CGATCTCGAA TGCCACCTGG TCGGCGCTGC TGGCCGCGAT CGAGGAGATG TCGGCCGGCA CCGATGAGAT GATGCCGGTC ATCGCGCATC TCGTGGGCGG GGACGACGTG CTCGTCAGCA TCCCCGCGCA CGAGGCCTGG TGGTTCACGC GCACACTGCA AATCACGTTC CAGGACGCCC TGGCCGCAGA ACTCGCCGAC GCGGGGCTGG CCGACCTGCC GGTGCCCACG GTGTCAGCGG CCATCGTGTT CCACCACAAG TTCAGCCCGC TGCCCGCCGC CGTGGACTTG GCGGGAGAGC TGCTCGCCCA CGCCAAGAAA CAGCATCGCG GTCAACGGGC GTCGCTGGCG TGGCAGGACA TCACCCACGA CGGGCCATAC CCACTCCATC ACCAAGCACC CGGCCAACGC CAAGCGCCCG CCCTGGACGC GCTCATCGAC GCCTGGGCGG ATCTCGACTC CCTGGCCGAG CTCGGCGCCT CAGCGCGGGC CAACCTCGCC GTGCTGGCCC GTCACACCGA CCCCGAGCGG GTGAAGGCCC ACGCGGAGCG CCTGGGGTTG TGGGATTCGG TGCAGCGGTT CCTCGACGGG CCCATCCCTC TCGAGGACGC CCTCGGCATG GTGCGGTGGT GGAGGACTAA ATGA
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Protein sequence | MTIFLDVAVV QIQSWLARTP HLRGRRGASR MIREATMAEA VDEMLTKFTD KARRNIAYGD IDGVIALEIL RDDAVDEVER HVMRHLRKRL PAAPLRSTRW EGQDSLDAHA ADEPLVTHDW PAPVPEWPAS KPCDWCRSWP ASREATVGAG DDRKQVQLCE DCGKRHRYAG FTTSTTATLK PGVERDLLER WHKEHNSKPT LPDKFPDLAL LGKENDNTHL ATVYADGNAV GKLNKELRDL RRNGIGTNFD LPQAISNATW SALLAAIEEM SAGTDEMMPV IAHLVGGDDV LVSIPAHEAW WFTRTLQITF QDALAAELAD AGLADLPVPT VSAAIVFHHK FSPLPAAVDL AGELLAHAKK QHRGQRASLA WQDITHDGPY PLHHQAPGQR QAPALDALID AWADLDSLAE LGASARANLA VLARHTDPER VKAHAERLGL WDSVQRFLDG PIPLEDALGM VRWWRTK
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